Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 RNU6-251P-201ENST00000363235 104 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 RNU6-1066P-201ENST00000363573 105 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 Y_RNA.408-201ENST00000383987 102 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 RNU6-1242P-201ENST00000391052 103 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 TMSB4XP8-201ENST00000402089 135 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL121978.1-201ENST00000402778 359 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 RNU6-584P-201ENST00000410350 95 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 RNU2-42P-201ENST00000410697 113 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL592148.1-201ENST00000413568 445 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL161449.1-201ENST00000414531 1199 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 TMSB4XP6-201ENST00000415187 135 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 TMSB4XP1-201ENST00000424567 135 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC092648.1-201ENST00000425870 423 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 GTF2IP7-202ENST00000436677 309 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 TRIM60P18-201ENST00000441518 828 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 RPL23AP33-201ENST00000442301 452 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC104073.1-201ENST00000451988 151 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL590639.1-201ENST00000456484 337 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 SNORD109B-201ENST00000458961 67 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 SNORD109A-201ENST00000459128 67 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 VPS26AP1-201ENST00000483197 979 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 RN7SL432P-201ENST00000484057 298 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC034159.1-201ENST00000513885 583 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC104057.1-201ENST00000515547 497 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC092470.1-201ENST00000546187 132 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC023813.2-201ENST00000564321 469 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC138915.2-201ENST00000569776 97 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 MIR3912-201ENST00000577566 105 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 NRBF2P5-201ENST00000603087 788 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC012119.1-201ENST00000603184 222 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL009028.1-201ENST00000604895 802 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 HMGN2P28-201ENST00000606102 262 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC009974.1-201ENST00000608881 455 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL138478.1-201ENST00000612252 832 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL050303.3-201ENST00000613704 284 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC121761.2-201ENST00000617300 689 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC090772.4-201ENST00000623599 362 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL078595.3-201ENST00000623815 1166 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL512506.2-201ENST00000624472 458 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 LINC02211-204ENST00000642024 1070 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AC011978.2-201ENST00000569835 2054 ntBASIC2.67□□□□□ -1.98
LHX9Q9NQ69 AL359893.1-201ENST00000447628 1580 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 MTND4P34-201ENST00000572715 1371 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 RNU6-301P-201ENST00000384277 107 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AL360182.1-201ENST00000397433 468 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 RPS4XP8-201ENST00000402039 771 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 Z75741.2-201ENST00000417272 1167 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 RPS3AP37-201ENST00000419176 745 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC005517.2-201ENST00000424673 553 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AL035410.1-201ENST00000427409 427 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AL662791.1-201ENST00000441992 928 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC092155.2-201ENST00000454675 477 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC005410.1-202ENST00000460347 485 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 OR4G11P-201ENST00000492842 939 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC134050.1-201ENST00000495088 933 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC117522.3-201ENST00000507974 584 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 RNA5SP76-201ENST00000516277 87 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AP000857.1-201ENST00000532151 543 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 HPRT1P3-201ENST00000539521 576 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC090502.2-201ENST00000549267 280 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 MTND1P8-201ENST00000571424 950 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC106052.1-201ENST00000608029 497 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC069234.5-201ENST00000611056 416 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC090617.7-201ENST00000623952 126 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 AC092447.7-201ENST00000422212 1621 ntBASIC2.66□□□□□ -1.98
LHX9Q9NQ69 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
LHX9Q9NQ69 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms