Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 CCT4P2-201ENST00000233836 1548 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 Y_RNA.97-201ENST00000363094 102 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 RNU6-173P-201ENST00000364215 104 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 RNU6-1078P-201ENST00000364522 103 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 MIR135A2-201ENST00000384854 100 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 U8.14-201ENST00000390843 143 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 RNU6-882P-201ENST00000391025 103 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 HSPE1P26-201ENST00000405341 275 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 RNU2-43P-201ENST00000410306 190 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AL359704.1-201ENST00000411586 781 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC109780.2-201ENST00000413467 845 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 LARP1BP3-201ENST00000437229 869 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC004866.2-201ENST00000438285 481 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 CEACAMP4-201ENST00000457676 421 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 RN7SL293P-201ENST00000481765 281 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC106707.2-201ENST00000484182 374 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC104619.4-201ENST00000510773 249 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 RN7SKP18-201ENST00000516005 275 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 MIR5195-201ENST00000583555 115 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC244505.7-201ENST00000599675 272 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AL590229.1-201ENST00000603497 542 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC091965.4-201ENST00000607691 587 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC009268.2-201ENST00000621925 457 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC048347.1-201ENST00000624621 427 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 MIR4275-201ENST00000636486 87 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC244258.1-201ENST00000637553 1071 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 ZNF833P-201ENST00000424938 1494 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 AC066616.2-201ENST00000559334 1481 ntBASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
POLR1BQ9H9Y6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.71□□□□□ -1.81
POLR1BQ9H9Y6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 TAB3P1-202ENST00000452645 1634 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 SNORD116-2-201ENST00000384274 95 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 SNORD116-6-201ENST00000384711 96 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 RPL7P8-201ENST00000411964 730 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 HSFY4P-201ENST00000415994 1181 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 BX119904.4-201ENST00000424402 301 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AP000907.1-201ENST00000428428 510 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 SKP1P1-201ENST00000438081 489 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 RPS17P13-201ENST00000448974 407 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 DNAJC19P1-201ENST00000455312 319 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL121766.1-201ENST00000547436 487 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC037471.2-201ENST00000564941 598 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 MIR5187-201ENST00000583479 76 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC083760.1-201ENST00000589621 670 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 TPMTP1-201ENST00000592307 737 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL022161.1-201ENST00000604390 213 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL355810.1-201ENST00000614629 552 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 MIR7975-201ENST00000619350 68 ntBASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.71□□□□□ -1.82
POLR1BQ9H9Y6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
POLR1BQ9H9Y6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
POLR1BQ9H9Y6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.7□□□□□ -1.82
POLR1BQ9H9Y6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
POLR1BQ9H9Y6 AL136372.1-201ENST00000403060 228 ntBASIC3.7□□□□□ -1.82
POLR1BQ9H9Y6 HSPE1P8-201ENST00000406997 288 ntBASIC3.7□□□□□ -1.82
POLR1BQ9H9Y6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.7□□□□□ -1.82
POLR1BQ9H9Y6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms