Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MTCYBP40-201ENST00000509390 1135 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-1213P-201ENST00000517075 94 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 Y_RNA.719-201ENST00000517156 106 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AP003122.3-201ENST00000526316 255 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 SNORA74C-1-201ENST00000580726 201 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 NF1P5-201ENST00000588287 448 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AF038458.1-201ENST00000588406 262 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 SNORD91B-202ENST00000608459 222 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC091905.4-201ENST00000623432 202 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 SCN1A-220ENST00000641603 12506 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A2Q9H9S3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A2Q9H9S3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A2Q9H9S3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SEC61A2Q9H9S3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.148-201ENST00000363557 117 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 MIR550A3-201ENST00000390735 95 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AL049697.2-201ENST00000403708 294 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 RPS12P24-201ENST00000412619 387 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 TBCAP2-201ENST00000416175 326 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 CYCSP10-201ENST00000417973 294 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC093414.1-201ENST00000434712 514 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 FABP5P14-201ENST00000437273 393 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC073587.1-201ENST00000447093 876 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 CYCSP34-201ENST00000458172 304 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 RN7SL517P-201ENST00000462240 305 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.654-201ENST00000497848 106 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 FTH1P24-201ENST00000503502 462 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 ENPP7P9-201ENST00000514456 627 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 RNA5SP454-201ENST00000517231 127 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 RN7SKP295-201ENST00000517264 153 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 FAM60DP-201ENST00000524174 632 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AP000676.2-201ENST00000529711 301 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC022882.1-201ENST00000532142 501 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AP000857.1-201ENST00000532151 543 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC092470.1-201ENST00000546187 132 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 MIR5690-201ENST00000583739 73 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 MIR3672-201ENST00000584290 82 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC104662.1-201ENST00000604448 511 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC025034.2-201ENST00000623264 286 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AL672167.1-205ENST00000641112 3080 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 AC099654.2-201ENST00000433031 1980 ntBASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SEC61A2Q9H9S3 MTND5P10-201ENST00000603719 1809 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC091046.3-201ENST00000631455 1574 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 MAPK10-286ENST00000641208 8747 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 SNORD113-7-201ENST00000363762 77 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-1318P-201ENST00000365389 103 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL357515.1-201ENST00000402967 542 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL136372.1-201ENST00000403060 228 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC093106.2-201ENST00000428212 385 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC112498.1-201ENST00000444401 332 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL353691.1-201ENST00000451332 387 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AL445433.1-201ENST00000457507 257 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 RNU7-59P-201ENST00000459101 61 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 RPS3AP41-201ENST00000462701 778 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 AC098591.2-201ENST00000510152 315 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-256P-201ENST00000516747 97 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 RNA5SP392-201ENST00000516905 112 ntBASIC4.32□□□□□ -1.72
SEC61A2Q9H9S3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms