Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SNORA40.14-201ENST00000516543 86 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC005341.1-201ENST00000571086 708 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 MIR5188-201ENST00000583467 113 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC012433.1-201ENST00000588916 398 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 RAC1P9-201ENST00000604990 392 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC023813.4-201ENST00000607580 580 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 U2.17-201ENST00000611454 95 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AL161423.1-201ENST00000613700 262 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AC004792.1-201ENST00000614523 137 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 MIR6886-201ENST00000619864 61 ntBASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NUCKS1Q9H1E3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 SNORA51.1-201ENST00000363243 140 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 RN7SKP124-201ENST00000364730 341 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC245028.2-201ENST00000458673 253 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 PLGLA-201ENST00000465668 449 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC026801.1-201ENST00000497178 464 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL139099.1-201ENST00000497398 403 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC084783.1-201ENST00000565846 910 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC130289.1-201ENST00000577321 73 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 MIR6768-201ENST00000610734 72 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL118522.2-201ENST00000616045 615 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AL138825.1-201ENST00000618587 192 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 AP001642.1-201ENST00000624727 2117 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 ZNF33CP-201ENST00000432492 2030 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 PABPC1P7-201ENST00000413177 1513 ntBASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NUCKS1Q9H1E3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 ZNF72P-201ENST00000425869 1908 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 SNORD113-1-201ENST00000365321 69 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 RNU6-387P-201ENST00000411331 105 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 CTSL3P-202ENST00000412179 788 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 RPL23AP69-201ENST00000431134 458 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 PPIAP13-201ENST00000434706 478 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC092647.2-201ENST00000452998 253 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC117503.1-201ENST00000472241 394 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AL136126.1-201ENST00000473603 402 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC011005.2-201ENST00000487324 359 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC011411.1-201ENST00000509592 876 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC108078.2-201ENST00000510750 236 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC103710.2-202ENST00000641454 2853 ntBASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.78□□□□□ -1.48
NUCKS1Q9H1E3 AC130650.2-201ENST00000618736 2403 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms