Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 MTATP6P17-201ENST00000431030 672 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 CETN4P-201ENST00000432407 469 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC108734.1-201ENST00000439549 399 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 TRGVB-201ENST00000453257 471 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 USP9YP34-201ENST00000453983 808 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 ATG12P2-201ENST00000456830 416 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC068724.1-201ENST00000487100 792 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 MTCYBP43-201ENST00000513621 740 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 COX6CP8-201ENST00000522620 226 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC090888.2-201ENST00000559765 1144 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 MIR4644-201ENST00000579929 84 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AL139344.1-201ENST00000605228 195 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AC110741.2-201ENST00000605278 268 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 MIR622-201ENST00000638396 96 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 SGO1P2-201ENST00000429458 1589 ntBASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.77□□□□□ -1.81
ZNF541Q9H0D2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 RNU6-821P-201ENST00000390995 107 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 RPS4XP8-201ENST00000402039 771 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 RPS15AP38-201ENST00000413110 372 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AL022400.1-201ENST00000423946 935 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC022018.1-201ENST00000430685 241 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 MEMO1P3-201ENST00000459811 302 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC126389.1-201ENST00000477436 290 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 TMEM248P1-201ENST00000510579 951 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC091515.1-201ENST00000548110 679 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC009094.1-201ENST00000564443 426 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC090616.5-202ENST00000582111 297 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 MIR4999-201ENST00000585029 91 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 BBIP1P1-201ENST00000602999 279 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC021171.1-201ENST00000603137 706 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC112220.3-201ENST00000605502 502 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 AC018755.4-201ENST00000619715 454 ntBASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
ZNF541Q9H0D2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 OR1S2-201ENST00000302592 978 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 RNU6-1249P-201ENST00000363237 111 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 SNORA18.3-201ENST00000384122 132 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 RNU6-1200P-201ENST00000384162 107 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 MTND4P13-201ENST00000402078 1023 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 MTCYBP38-201ENST00000417160 1123 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC098592.1-201ENST00000419352 333 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 MTCO2P5-201ENST00000422621 426 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AL953862.1-201ENST00000423016 168 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 ZYG11AP1-201ENST00000430329 837 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 USP9YP7-201ENST00000436723 430 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 YWHAZP7-201ENST00000436906 631 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 PAXBP1P1-201ENST00000449315 447 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 USP9YP32-201ENST00000452432 430 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 HMGB1P15-201ENST00000453854 435 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC107934.2-201ENST00000518653 310 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 HSPA8P13-201ENST00000523715 472 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 CYCSP2-201ENST00000558168 301 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC145350.1-201ENST00000567426 208 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 AC009101.1-201ENST00000568135 242 ntBASIC3.75□□□□□ -1.81
ZNF541Q9H0D2 MIR4435-1-201ENST00000582552 80 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms