Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC245036.5-201ENST00000596330 847 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 CYCSP41-201ENST00000616920 296 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AL353748.2-201ENST00000622148 471 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC090897.3-201ENST00000636973 1157 ntBASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.3□□□□□ -1.88
CCSER1Q9C0I3 CDR1-202ENST00000625883 1485 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC093010.3-201ENST00000570269 15214 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 RNU1-35P-201ENST00000362782 153 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 RNU1-140P-201ENST00000365040 165 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 RNU6-224P-201ENST00000384055 107 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AL136372.1-201ENST00000403060 228 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC007435.1-201ENST00000421086 415 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC079780.1-201ENST00000428259 207 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 RPL39P6-201ENST00000448289 150 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 RPL37P4-201ENST00000448908 268 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC026410.2-201ENST00000460281 156 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 COX7A2P2-201ENST00000505291 250 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC009812.2-201ENST00000517657 457 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC087808.1-201ENST00000520501 361 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 HSPE1P3-201ENST00000559254 309 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC015871.2-201ENST00000603605 948 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC012443.1-201ENST00000605605 231 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC093732.2-201ENST00000607950 274 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AP002826.1-201ENST00000608835 315 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 CRYM-AS1-204ENST00000637983 556 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 AC103988.1-201ENST00000566382 2177 ntBASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCSER1Q9C0I3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC096644.4-201ENST00000563417 2912 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 RNU5E-10P-201ENST00000363506 118 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 SNRPEP2-201ENST00000397592 279 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 EZH2P1-201ENST00000431167 291 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 MTCO3P11-201ENST00000455103 774 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 RN7SL283P-201ENST00000489055 303 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 OR4G11P-201ENST00000492842 939 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 MTCYBP16-201ENST00000509187 1129 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 HSPA8P13-201ENST00000523715 472 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC239860.2-201ENST00000525886 270 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 MIR4637-201ENST00000582405 84 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AL022067.1-201ENST00000602426 454 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC073387.2-201ENST00000604797 784 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AL160281.1-201ENST00000605307 311 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC112220.2-201ENST00000605513 533 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 Z99129.2-201ENST00000619967 314 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC090772.4-201ENST00000623599 362 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC099654.9-201ENST00000637055 678 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AC097714.1-201ENST00000511272 1647 ntBASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCSER1Q9C0I3 AP005901.5-201ENST00000545779 1796 ntBASIC3.28□□□□□ -1.89
CCSER1Q9C0I3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AL513185.3-201ENST00000433335 1300 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 SNORA9.2-201ENST00000365361 133 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 SNORA1.3-201ENST00000384676 136 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AL451074.5-201ENST00000415894 435 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 Z75741.2-201ENST00000417272 1167 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 C1DP1-201ENST00000426049 402 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 MTND2P5-201ENST00000432656 1006 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC244505.4-201ENST00000434905 287 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 SSXP5-201ENST00000443473 287 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms