Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC007619.2-201ENST00000605743 379 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC019193.2-201ENST00000610012 634 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC069234.5-201ENST00000611056 416 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 uc_338.11-201ENST00000619132 160 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AC079684.1-201ENST00000621405 437 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 AL672167.1-203ENST00000641299 2975 ntBASIC4.89□□□□□ -1.63
TRIM55Q9BYV6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC012618.3-205ENST00000637896 1496 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC087190.4-201ENST00000574616 8334 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 RNU4-20P-201ENST00000365601 151 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 MIR141-201ENST00000384975 95 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 SNORD96B-201ENST00000386148 79 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 U3.35-201ENST00000408405 208 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 RNU2-41P-201ENST00000410991 178 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 FAR2P2-201ENST00000413041 594 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AL161631.1-201ENST00000417933 486 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 EI24P4-201ENST00000423683 1078 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 RPS29P9-201ENST00000440360 171 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 MTND3P16-201ENST00000452205 344 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC097484.1-201ENST00000471148 389 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 DEFB109F-201ENST00000491870 277 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC078817.1-201ENST00000492623 435 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 OR51K1P-201ENST00000510214 950 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC010486.1-201ENST00000511793 424 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 RNA5SP360-201ENST00000516555 118 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 PSMA2P1-201ENST00000526365 646 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC109635.4-202ENST00000531666 412 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 SNRPGP16-201ENST00000533275 226 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 RPL21P7-201ENST00000557463 483 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC091135.1-201ENST00000585943 307 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC067852.3-201ENST00000589177 561 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AC100810.6-201ENST00000638068 285 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 AL157700.1-201ENST00000561973 1432 ntBASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
TRIM55Q9BYV6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 MIR514A2-201ENST00000385131 88 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 MIR514A3-201ENST00000385132 88 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 RNU6-1009P-201ENST00000390996 107 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 RNU6-332P-201ENST00000391193 108 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AL606923.1-201ENST00000406616 190 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 SNORA77-201ENST00000408716 125 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 RNU6-387P-201ENST00000411331 105 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 RSU1P3-201ENST00000412878 835 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC009237.10-201ENST00000414112 510 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC068287.1-201ENST00000430283 295 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 RHOT1P3-201ENST00000436571 331 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 NEFMP1-201ENST00000443423 1006 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 RN7SL738P-201ENST00000470264 297 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 HSPE1P6-201ENST00000479457 291 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC106872.2-201ENST00000494303 480 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC104806.1-201ENST00000508720 308 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC098591.2-201ENST00000510152 315 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC007016.1-201ENST00000512110 244 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC012339.2-201ENST00000523996 453 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC087477.6-201ENST00000559595 843 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 RN7SL176P-201ENST00000580352 264 ntBASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.87□□□□□ -1.63
TRIM55Q9BYV6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms