Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 OR8K4P-201ENST00000534608 872 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC126177.3-201ENST00000551839 688 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 BNIP3P22-201ENST00000593399 556 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AL035413.2-201ENST00000604801 525 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 OR2AS2P-201ENST00000606902 342 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 STMN1P1-201ENST00000617809 440 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 AC027309.3-201ENST00000623419 351 ntBASIC1.49□□□□□ -2.17
LIMD2Q9BT23 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
LIMD2Q9BT23 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC004944.1-201ENST00000517807 3059 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 MTND5P31-201ENST00000419366 1374 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 MTND4P35-201ENST00000604257 1375 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 FRG1BP-201ENST00000278882 761 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 RNU4-23P-201ENST00000362839 140 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 SNORA68.1-201ENST00000364537 132 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 SNORA18.3-201ENST00000384122 132 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 SNORA51.11-201ENST00000384442 131 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 MIR196B-201ENST00000384852 84 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 RNU6-193P-201ENST00000410977 107 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 RNU6-272P-201ENST00000411028 104 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC092745.2-202ENST00000411880 369 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 UBE2V1P9-201ENST00000414760 368 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 MTCO2P17-201ENST00000424336 677 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AL445687.1-201ENST00000439946 251 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AL606490.8-201ENST00000441624 319 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 RAB11AP1-201ENST00000442978 646 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 snoU109.4-201ENST00000458953 143 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 snoU13.22-201ENST00000459428 104 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 RPL31P41-201ENST00000477967 372 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 SNORA70.16-201ENST00000516390 95 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC068339.2-201ENST00000534395 618 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC079600.2-201ENST00000550076 130 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 TRAV28-201ENST00000557548 323 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC009268.1-201ENST00000561352 1203 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AGGF1P5-201ENST00000567900 919 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC010546.1-201ENST00000569391 485 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 NRBF2P5-201ENST00000603087 788 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC079089.3-201ENST00000603094 673 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 VN1R74P-201ENST00000613259 503 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AP006248.3-201ENST00000623580 594 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC092608.3-201ENST00000625017 386 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AP001002.2-201ENST00000625137 386 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 CYP3A51P-201ENST00000633513 256 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC017104.5-201ENST00000637647 639 ntBASIC1.48□□□□□ -2.17
LIMD2Q9BT23 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LIMD2Q9BT23 AC022336.2-201ENST00000568966 2538 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC109315.1-201ENST00000584143 1347 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 RPL21P132-201ENST00000331267 462 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 Y_RNA.333-201ENST00000365274 102 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 SNORA41-201ENST00000384675 132 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AL360182.1-201ENST00000397433 468 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 SNORA11.1-201ENST00000408133 129 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 USP9YP20-201ENST00000419224 558 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 HMGN2P38-201ENST00000423806 265 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 WARS2P1-201ENST00000429678 537 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC010881.1-201ENST00000433830 235 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 NDUFB4P6-201ENST00000436819 366 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 UBE2V1P13-201ENST00000436983 439 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC000041.1-201ENST00000439655 175 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 IPO7P1-201ENST00000442031 636 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AL513328.1-201ENST00000446460 224 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms