Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
IFT140Q96RY7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 AL359740.1-201ENST00000624340 592 ntBASIC2.94□□□□□ -1.94
IFT140Q96RY7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC109583.1-201ENST00000432156 268 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 ARPC3P2-201ENST00000457786 533 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC109486.1-201ENST00000486833 374 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC055855.1-201ENST00000489563 579 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 ARL4AP2-201ENST00000507378 601 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 LDHBP3-201ENST00000514909 822 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC084757.1-201ENST00000559987 490 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 AC098848.2-201ENST00000588023 330 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 AL645939.4-201ENST00000604495 135 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 VIS1.1-201ENST00000610517 203 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 HPVC1-201ENST00000629899 1198 ntBASIC2.93□□□□□ -1.94
IFT140Q96RY7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
IFT140Q96RY7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
IFT140Q96RY7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
IFT140Q96RY7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
IFT140Q96RY7 RNA5SP27-201ENST00000363839 119 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 RPL21P75-201ENST00000396599 483 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 RPL21P1-201ENST00000399532 476 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 RPL21P28-201ENST00000401418 483 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 AL592114.1-201ENST00000403842 483 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 POLHP1-201ENST00000411806 470 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 AL451074.3-201ENST00000437709 472 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 HIGD1AP11-201ENST00000438361 280 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 AL157827.1-201ENST00000447622 132 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.92□□□□□ -1.94
IFT140Q96RY7 RPL21P16-201ENST00000495531 483 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 HMGB3P15-201ENST00000507326 574 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
IFT140Q96RY7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.92□□□□□ -1.94
IFT140Q96RY7 AC067838.1-201ENST00000606064 577 ntBASIC2.92□□□□□ -1.94
IFT140Q96RY7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
IFT140Q96RY7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
IFT140Q96RY7 RNA5SP295-201ENST00000362655 121 ntBASIC2.91□□□□□ -1.94
IFT140Q96RY7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.91□□□□□ -1.94
IFT140Q96RY7 VN1R31P-201ENST00000417498 730 ntBASIC2.91□□□□□ -1.94
IFT140Q96RY7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
IFT140Q96RY7 AC087190.1-201ENST00000484462 480 ntBASIC2.91□□□□□ -1.94
IFT140Q96RY7 AC079804.2-201ENST00000490376 200 ntBASIC2.91□□□□□ -1.94
IFT140Q96RY7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.91□□□□□ -1.94
IFT140Q96RY7 RNA5SP102-201ENST00000516865 106 ntBASIC2.91□□□□□ -1.94
IFT140Q96RY7 AL353748.2-201ENST00000622148 471 ntBASIC2.91□□□□□ -1.94
IFT140Q96RY7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.91□□□□□ -1.94
IFT140Q96RY7 AC011978.2-201ENST00000569835 2054 ntBASIC2.91□□□□□ -1.94
IFT140Q96RY7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
IFT140Q96RY7 RNA5SP160-201ENST00000364866 120 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 RPL5P19-201ENST00000404228 893 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 RNA5SP181-201ENST00000410246 98 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 RAD23BP2-201ENST00000416003 1207 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 RPL7P37-201ENST00000425095 738 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 AC027673.1-201ENST00000456245 405 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 MTND5P4-201ENST00000514978 288 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 RNA5SP402-201ENST00000517148 110 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.94
IFT140Q96RY7 AL135786.2-201ENST00000608422 615 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 AC116447.1-201ENST00000613153 453 ntBASIC2.9□□□□□ -1.94
IFT140Q96RY7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
IFT140Q96RY7 AF274854.1-201ENST00000413236 615 ntBASIC2.9□□□□□ -1.95
IFT140Q96RY7 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.9□□□□□ -1.95
IFT140Q96RY7 SSXP1-201ENST00000453640 473 ntBASIC2.9□□□□□ -1.95
IFT140Q96RY7 SNX5P1-201ENST00000505757 1041 ntBASIC2.9□□□□□ -1.95
IFT140Q96RY7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.9□□□□□ -1.95
IFT140Q96RY7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.9□□□□□ -1.95
IFT140Q96RY7 AL163153.1-201ENST00000554223 283 ntBASIC2.9□□□□□ -1.95
IFT140Q96RY7 RPL23AP88-201ENST00000605759 454 ntBASIC2.9□□□□□ -1.95
IFT140Q96RY7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.89□□□□□ -1.95
IFT140Q96RY7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.89□□□□□ -1.95
IFT140Q96RY7 AL513331.1-201ENST00000411908 397 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 AC013268.2-201ENST00000420753 337 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.89□□□□□ -1.95
IFT140Q96RY7 HMGB3P10-201ENST00000434734 572 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.89□□□□□ -1.95
IFT140Q96RY7 RPL23AP7-203ENST00000449021 469 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 AC025033.1-201ENST00000463883 194 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 RPL23AP55-201ENST00000498163 452 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 AC109464.2-201ENST00000510242 943 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.89□□□□□ -1.95
IFT140Q96RY7 MIR4452-201ENST00000583004 71 ntBASIC2.89□□□□□ -1.95
IFT140Q96RY7 USP9YP15-201ENST00000442391 422 ntBASIC2.88□□□□□ -1.95
IFT140Q96RY7 AL021397.1-201ENST00000451806 248 ntBASIC2.88□□□□□ -1.95
IFT140Q96RY7 HMGB3P30-201ENST00000457863 606 ntBASIC2.88□□□□□ -1.95
IFT140Q96RY7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.88□□□□□ -1.95
IFT140Q96RY7 AL512283.1-201ENST00000606756 1384 ntBASIC2.88□□□□□ -1.95
IFT140Q96RY7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.88□□□□□ -1.95
IFT140Q96RY7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
IFT140Q96RY7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
IFT140Q96RY7 MIR124-3-201ENST00000384866 87 ntBASIC2.87□□□□□ -1.95
IFT140Q96RY7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.87□□□□□ -1.95
IFT140Q96RY7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms