Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AL590762.4-201ENST00000425885 253 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AL360081.1-201ENST00000428299 555 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 USP12PX-201ENST00000432383 1057 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AC083863.1-201ENST00000438811 231 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 RPL17P49-201ENST00000443728 411 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 MTND2P22-201ENST00000444325 1033 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 RNA5SP246-201ENST00000458909 119 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 U3.44-201ENST00000458938 192 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 RNA5SP310-201ENST00000459084 116 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 RNU6-64P-201ENST00000517119 105 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AC100870.1-201ENST00000522035 505 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AL157394.1-201ENST00000562983 1224 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 MIR3118-1-201ENST00000581787 76 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 BX664608.1-201ENST00000610519 487 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 Z69908.1-201ENST00000622603 247 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AL445363.3-201ENST00000623080 671 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AC091953.3-201ENST00000623220 236 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 AC103988.1-201ENST00000566382 2177 ntBASIC3.48□□□□□ -1.85
CMTM3Q96MX0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
CMTM3Q96MX0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC116667.1-201ENST00000604855 2072 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 RNA5SP87-201ENST00000384155 118 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 HSPE1P8-201ENST00000406997 288 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 RNU2-62P-201ENST00000410868 191 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 RPL37P18-201ENST00000411602 243 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AL590383.1-201ENST00000428602 75 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 MTND1P28-201ENST00000435623 950 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 TAF9P1-201ENST00000445421 515 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 TAF9P2-201ENST00000454958 515 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC099563.1-201ENST00000456086 418 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC010326.1-201ENST00000462726 602 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 RPL21P8-201ENST00000465083 535 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC093534.1-201ENST00000504977 132 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 RN7SKP209-201ENST00000516888 304 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC107934.1-201ENST00000522215 217 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC084783.1-201ENST00000565846 910 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC239868.4-201ENST00000608318 671 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 Mico1.1-201ENST00000611698 204 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AL158063.1-201ENST00000615349 536 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC068831.7-201ENST00000616954 363 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC108479.2-201ENST00000617314 601 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC002076.2-201ENST00000617362 122 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 SNHG22-203ENST00000617833 660 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC026422.1-201ENST00000623961 452 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AC091953.2-201ENST00000623979 160 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 AL136313.1-201ENST00000624804 202 ntBASIC3.47□□□□□ -1.85
CMTM3Q96MX0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CMTM3Q96MX0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
CMTM3Q96MX0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 AC092104.1-201ENST00000497346 1441 ntBASIC3.46□□□□□ -1.86
CMTM3Q96MX0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.46□□□□□ -1.86
CMTM3Q96MX0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms