Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC073073.2-201ENST00000609827 2578 ntBASIC3.4□□□□□ -1.86
VMP1Q96GC9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VMP1Q96GC9 MIR23B-201ENST00000384832 97 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 MTCYBP38-201ENST00000417160 1123 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 ARPC3P1-201ENST00000437218 533 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC112653.1-201ENST00000443851 386 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 VN1R34P-201ENST00000447387 883 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC021146.5-201ENST00000503544 545 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 DSTNP2-201ENST00000504533 515 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 RNA5SP385-201ENST00000515947 110 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 HMGN1P28-201ENST00000521340 364 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 AP003497.1-201ENST00000528472 562 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 MIR4429-201ENST00000580105 73 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AC009268.2-201ENST00000621925 457 ntBASIC3.4□□□□□ -1.87
VMP1Q96GC9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VMP1Q96GC9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VMP1Q96GC9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VMP1Q96GC9 AL049641.1-201ENST00000441055 1948 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VMP1Q96GC9 MIR30E-201ENST00000362104 92 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 RNU6-270P-201ENST00000364131 105 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 MIR449B-201ENST00000384995 97 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC069157.1-201ENST00000421749 137 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 HMGN2P30-201ENST00000423237 256 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC129850.1-201ENST00000436203 508 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 RPL23AP22-201ENST00000437556 453 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC125238.1-201ENST00000448842 249 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC020893.1-201ENST00000502452 580 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 POU5F1P7-201ENST00000508759 541 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC104619.4-201ENST00000510773 249 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 SNORA31.21-201ENST00000517180 77 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 RNU6-840P-201ENST00000517275 65 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC008507.1-201ENST00000587506 734 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC020914.6-201ENST00000594327 272 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC008739.3-201ENST00000603262 127 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC010591.1-201ENST00000603941 649 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AL157392.4-201ENST00000609756 345 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC244258.1-201ENST00000637553 1071 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC010680.1-201ENST00000590024 3590 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC138915.1-201ENST00000565427 1685 ntBASIC3.39□□□□□ -1.87
VMP1Q96GC9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VMP1Q96GC9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
VMP1Q96GC9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VMP1Q96GC9 AC007656.2-201ENST00000624902 4547 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 RNU6-289P-201ENST00000364093 107 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 RNU6-114P-201ENST00000384704 105 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 Z85995.1-201ENST00000415547 335 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AL354692.1-201ENST00000423044 315 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 RPS25P9-201ENST00000435591 252 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 UBE2V1P13-201ENST00000436983 439 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VMP1Q96GC9 PAXBP1P1-201ENST00000449315 447 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC073387.1-201ENST00000453261 709 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 USP9YP10-201ENST00000454868 628 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 RPS4XP2-201ENST00000458402 793 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 RPS20P20-201ENST00000460498 340 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AL135752.1-201ENST00000479477 471 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC106707.2-201ENST00000484182 374 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 RN7SKP157-201ENST00000516174 282 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
VMP1Q96GC9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.38□□□□□ -1.87
VMP1Q96GC9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms