Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AC092798.1-201ENST00000458542 409 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC47Q96A33 AC079203.1-201ENST00000487972 404 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 RPL21P131-201ENST00000497298 483 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC47Q96A33 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC47Q96A33 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC47Q96A33 CASP1P1-201ENST00000526345 212 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC47Q96A33 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC47Q96A33 MIR3921-201ENST00000577308 85 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC47Q96A33 BNIP3P11-201ENST00000603878 563 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 AC131902.3-201ENST00000611767 581 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 AC023158.2-201ENST00000614876 543 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC47Q96A33 AC108206.1-201ENST00000570186 4159 ntBASIC3.43□□□□□ -1.86
CCDC47Q96A33 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC47Q96A33 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC47Q96A33 RNA5SP72-201ENST00000364442 117 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RNU6-1197P-201ENST00000391183 107 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RPL21P75-201ENST00000396599 483 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RPL21P28-201ENST00000401418 483 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AL592114.1-201ENST00000403842 483 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RNA5SP492-201ENST00000411330 114 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 BMS1P22-201ENST00000414726 313 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC234781.2-201ENST00000426370 994 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 MTND2P20-201ENST00000440805 661 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RPL26P6-201ENST00000440913 438 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 UBBP3-201ENST00000445497 241 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC016696.1-201ENST00000446949 318 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RN7SL75P-201ENST00000461926 281 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RPL21P39-201ENST00000463605 483 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC011979.1-201ENST00000472300 483 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RPL21P93-201ENST00000480465 489 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC233702.1-201ENST00000482905 502 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC087190.1-201ENST00000484462 480 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RN7SL633P-201ENST00000488974 297 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC093591.1-201ENST00000491435 481 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RPL21P129-201ENST00000491732 478 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RPL21P16-201ENST00000495531 483 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC114981.1-201ENST00000503897 678 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC118282.1-201ENST00000506408 765 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RAC1P5-201ENST00000512182 576 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC017037.2-201ENST00000513850 890 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC022483.1-201ENST00000514020 567 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 RN7SKP272-201ENST00000516988 232 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC47Q96A33 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 SETP2-201ENST00000553886 926 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 MIR5680-201ENST00000577577 84 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 AL606834.2-201ENST00000602954 668 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC069304.2-201ENST00000605154 435 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC024060.1-201ENST00000607052 494 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC024257.5-201ENST00000612739 531 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 MTND5P19-201ENST00000424872 1794 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 AC012321.1-201ENST00000561622 1588 ntBASIC3.42□□□□□ -1.86
CCDC47Q96A33 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
CCDC47Q96A33 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC47Q96A33 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC47Q96A33 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC47Q96A33 SNORD56.5-201ENST00000364281 72 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 U8.9-201ENST00000365667 134 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 RN7SKP58-201ENST00000411010 305 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 RNA5SP344-201ENST00000411081 104 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 AL592310.1-201ENST00000414330 671 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 PRSS3P4-201ENST00000453323 162 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 AC010099.1-201ENST00000455434 375 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 AL138955.1-201ENST00000622881 1040 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 AL356473.1-201ENST00000406203 1408 ntBASIC3.41□□□□□ -1.86
CCDC47Q96A33 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC47Q96A33 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC47Q96A33 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CCDC47Q96A33 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC47Q96A33 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC47Q96A33 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.86
CCDC47Q96A33 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms