Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AP000907.2-201ENST00000530827 353 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.8□□□□□ -1.64
ERCC4Q92889 AC233309.1-201ENST00000619522 751 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 CR381572.1-201ENST00000625098 102 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ERCC4Q92889 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
ERCC4Q92889 DHX40P1-201ENST00000588725 1412 ntBASIC4.8□□□□□ -1.64
ERCC4Q92889 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ERCC4Q92889 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 RNA5SP388-201ENST00000362584 119 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 SNORD56.2-201ENST00000363242 71 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RNU6-97P-201ENST00000363387 104 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RNU4-76P-201ENST00000364509 141 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RNY4P16-201ENST00000364768 94 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RNU6-456P-201ENST00000384493 107 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC068050.1-201ENST00000394891 380 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RNA5SP118-201ENST00000410385 109 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RNA5SP39-201ENST00000411245 120 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC4Q92889 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC007283.2-201ENST00000424739 197 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC008065.1-201ENST00000428525 348 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 RPS15AP9-201ENST00000439856 381 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AL353691.1-201ENST00000451332 387 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 PMCHL2-203ENST00000457791 237 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC087385.1-201ENST00000475062 312 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC4Q92889 OR5H5P-201ENST00000503164 928 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC025465.4-201ENST00000513422 638 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC4Q92889 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.79□□□□□ -1.64
ERCC4Q92889 SNORA40.12-201ENST00000516329 111 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RNA5SP337-201ENST00000517007 109 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 CENPUP1-201ENST00000526649 1202 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 PTP4A1P6-201ENST00000531034 478 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC006064.5-201ENST00000541782 248 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC055876.1-202ENST00000567053 138 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC4Q92889 MIR4644-201ENST00000579929 84 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC112230.1-201ENST00000604342 547 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AL136363.1-201ENST00000605349 337 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AC019193.2-201ENST00000610012 634 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RMST_3.1-201ENST00000611651 109 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 MIR6798-201ENST00000612887 67 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC006504.8-201ENST00000621046 635 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 YWHAEP7-203ENST00000622054 312 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 AL359697.1-201ENST00000624879 587 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC4Q92889 AC138649.5-201ENST00000637456 137 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ERCC4Q92889 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.79□□□□□ -1.64
ERCC4Q92889 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC4Q92889 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.79□□□□□ -1.64
ERCC4Q92889 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ERCC4Q92889 CKAP2P1-201ENST00000555477 2049 ntBASIC4.79□□□□□ -1.64
ERCC4Q92889 MTND4P29-201ENST00000503122 1372 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AC092326.2-201ENST00000624772 1561 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC4Q92889 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC4Q92889 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
ERCC4Q92889 RNA5SP175-201ENST00000364275 119 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 Y_RNA.263-201ENST00000364659 114 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 SNORA37-201ENST00000384504 129 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 RNU6-1158P-201ENST00000391167 107 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 MRPL50P2-201ENST00000416821 482 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AL807761.1-201ENST00000417622 171 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 RPS15AP40-201ENST00000419621 391 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AC119618.1-201ENST00000434191 222 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 SEPT14P3-201ENST00000439401 183 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 AL732372.2-207ENST00000445840 183 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.78□□□□□ -1.64
ERCC4Q92889 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 ELOCP23-201ENST00000452014 332 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 SEPT14P2-201ENST00000453405 183 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.78□□□□□ -1.64
ERCC4Q92889 SNORD121B-201ENST00000458838 81 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 AP000926.1-201ENST00000479573 241 ntBASIC4.78□□□□□ -1.64
ERCC4Q92889 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms