Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC068790.6-201ENST00000602558 258 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC012468.1-201ENST00000604888 430 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC064801.1-201ENST00000612025 407 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC026368.1-201ENST00000614934 690 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC091953.2-201ENST00000623979 160 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 PNPT1P2-201ENST00000456768 2050 ntBASIC3.96□□□□□ -1.77
HMGB4Q8WW32 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 RNY4P34-201ENST00000364779 95 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 SNORD3H-201ENST00000384486 214 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 MIR513A2-201ENST00000385249 127 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 RPL21P17-201ENST00000397467 475 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AL121834.1-202ENST00000404494 277 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 RN7SKP177-201ENST00000410567 355 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 MTCO3P12-201ENST00000416718 547 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 SSXP9-201ENST00000417503 292 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 C1DP2-201ENST00000418167 426 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 RABEPKP1-201ENST00000440529 1026 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 FABP3P2-201ENST00000453169 399 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 PRSS3P4-201ENST00000453323 162 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 NANOGP10-201ENST00000453325 895 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 RPL21P11-201ENST00000461458 483 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC010469.1-201ENST00000463864 576 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 RPS26P28-201ENST00000470806 348 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC020893.1-201ENST00000502452 580 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC138853.1-201ENST00000503549 823 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 HMGN1P11-201ENST00000508668 303 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 PPBPP1-201ENST00000510807 373 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC026726.1-201ENST00000512859 601 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 DUXAP2-201ENST00000519198 589 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 MTCYBP20-201ENST00000524239 1129 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AL133271.1-201ENST00000538229 291 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 YPEL5P3-201ENST00000547227 352 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 CCNG2P1-201ENST00000549521 1000 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 MIR3146-201ENST00000580367 79 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 COX6CP3-201ENST00000580869 223 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 SRGNP1-201ENST00000603392 451 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC015813.4-201ENST00000610469 179 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC091834.1-201ENST00000614543 472 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 MIR6130-201ENST00000619419 109 ntBASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HMGB4Q8WW32 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AL157700.1-201ENST00000561973 1432 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 MIR448-201ENST00000362131 111 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 Y_RNA.582-201ENST00000391023 95 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 RNU6-192P-201ENST00000391253 100 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 RPL17P50-201ENST00000396131 546 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AL160275.2-201ENST00000412010 394 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 MTND1P34-201ENST00000438556 671 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 RPS24P6-201ENST00000452670 400 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC234775.1-201ENST00000454247 670 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC078918.1-201ENST00000498515 228 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 RPL37P25-201ENST00000507308 276 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 RNA5SP154-201ENST00000516193 111 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.95□□□□□ -1.78
HMGB4Q8WW32 EIF1P4-201ENST00000572664 335 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC006270.2-201ENST00000578523 652 ntBASIC3.95□□□□□ -1.78
HMGB4Q8WW32 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms