Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AL031595.2-201ENST00000624215 19071 ntBASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.21□□□□□ -1.58
SHKBP1Q8TBC3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.14-201ENST00000362415 103 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-562P-201ENST00000362731 107 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-200P-201ENST00000364743 107 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.562-201ENST00000384695 113 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 MIR649-201ENST00000384843 97 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 MIR450B-201ENST00000401182 78 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RPL21P67-201ENST00000402896 478 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AL359643.1-201ENST00000404109 423 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RPS16P5-201ENST00000406501 404 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNU2-23P-201ENST00000410545 195 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNU2-38P-201ENST00000410856 79 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RN7SKP100-201ENST00000411258 284 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 E2F6P2-201ENST00000420708 748 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 PIGPP3-201ENST00000425307 415 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AC236972.1-201ENST00000433225 199 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 FTH1P1-201ENST00000437933 532 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 HMGB3P30-201ENST00000457863 606 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-120P-201ENST00000516077 103 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-189P-201ENST00000516120 101 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 SOD1P3-201ENST00000518682 454 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AC209154.1-201ENST00000582156 337 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AC068790.4-201ENST00000602474 263 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 HSPE1P14-201ENST00000605812 302 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-84P-201ENST00000607737 102 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AC091903.1-201ENST00000624322 454 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 U6.114-201ENST00000636407 96 ntBASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHKBP1Q8TBC3 AC026523.2-201ENST00000625039 7739 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC107021.2-201ENST00000567714 2095 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-511P-201ENST00000363496 107 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.180-201ENST00000363867 113 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-770P-201ENST00000363929 105 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.785-201ENST00000384290 109 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.483-201ENST00000384380 101 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 SNORA48.4-201ENST00000391089 134 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AL445529.1-201ENST00000398713 389 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AL023807.1-201ENST00000407932 359 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RPL12P18-201ENST00000437175 325 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RPL21P89-201ENST00000444021 467 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC091180.1-201ENST00000462104 372 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC006967.1-201ENST00000467608 589 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC090686.1-201ENST00000481577 749 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC022493.2-201ENST00000506122 481 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC018797.3-201ENST00000513388 1241 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RPS27AP18-201ENST00000515536 459 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RNU7-51P-201ENST00000516560 62 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-182P-201ENST00000516970 105 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 IGHV3-76-201ENST00000522465 295 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 SETP2-201ENST00000553886 926 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC006363.1-201ENST00000603806 463 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC010424.2-201ENST00000607594 443 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 ATP5A1P2-202ENST00000616464 443 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AL357559.1-201ENST00000622228 274 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 MIR7641-1-201ENST00000627518 61 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AL606534.2-204ENST00000635008 178 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AL512643.1-201ENST00000635735 524 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms