Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 Y_RNA.36-201ENST00000362602 112 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNU4-31P-201ENST00000384211 141 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 BTBD10P2-201ENST00000404779 676 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 FO393414.1-201ENST00000428697 1184 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 PSMA2P3-201ENST00000429685 675 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 OR51B8P-201ENST00000449892 769 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 TPMTP4-201ENST00000450749 678 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 SNORA31.15-201ENST00000516771 132 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 FAM60CP-201ENST00000591086 664 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AP001542.2-201ENST00000593141 364 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 Clostridiales-1.2-201ENST00000636724 160 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNU6-317P-201ENST00000384031 107 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MIR142-201ENST00000384835 87 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL356320.1-201ENST00000429616 163 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 UBE2V1P6-201ENST00000430840 422 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC092991.1-201ENST00000477176 376 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RPL30P11-201ENST00000495304 339 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 ATP5EP1-201ENST00000510257 156 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 HSPE1P18-201ENST00000517602 280 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC025048.6-202ENST00000627667 438 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 OR5H15-201ENST00000383696 930 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MTATP6P11-201ENST00000428071 670 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 Z82205.1-201ENST00000428456 297 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 UBE2V2P1-201ENST00000434717 398 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 FABP5P13-201ENST00000452144 328 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AIG1P1-201ENST00000503376 148 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 KATNBL1P4-201ENST00000503545 918 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC113398.2-201ENST00000507630 558 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 XKRY-201ENST00000510392 1100 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MTCO1P30-201ENST00000515244 580 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC109635.4-202ENST00000531666 412 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL645944.1-201ENST00000603857 493 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RPL23AP88-201ENST00000605759 454 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC011460.1-201ENST00000636268 1834 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 GSTA9P-201ENST00000406231 611 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 LSM5-205ENST00000409952 687 ntTSL 4 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNA5SP270-201ENST00000411361 118 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RPS24P8-201ENST00000431490 402 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL392003.1-201ENST00000434394 243 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC104389.3-201ENST00000445629 235 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC080013.2-201ENST00000460866 323 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC100870.1-201ENST00000522035 505 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 OR6C73P-201ENST00000546432 358 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AKIRIN1P1-201ENST00000547384 544 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MIR5007-201ENST00000583098 95 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 PSMA6P4-201ENST00000603247 718 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC103710.1-201ENST00000610003 901 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC022336.2-201ENST00000568966 2538 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 SNORA26.9-201ENST00000391322 122 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNA5SP274-201ENST00000410484 108 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RNU6-1140P-201ENST00000410517 106 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 SUMO1P4-201ENST00000429430 302 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 MTND2P29-201ENST00000438595 412 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AL109741.2-201ENST00000455561 343 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 HMGN2P13-201ENST00000476476 274 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC018630.1-201ENST00000541376 925 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC0.66□□□□□ -2.3
SYNE1Q8NF91 AC135628.1-201ENST00000568867 534 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 RBM12B-AS1-201ENST00000623283 653 ntBASIC0.66□□□□□ -2.3
SYNE1Q8NF91 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AL023807.1-201ENST00000407932 359 ntBASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 HMGN1P8-201ENST00000463578 288 ntBASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AC107222.1-201ENST00000510899 637 ntBASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 VN1R80P-201ENST00000597126 338 ntBASIC0.65□□□□□ -2.3
SYNE1Q8NF91 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC0.65□□□□□ -2.3
SYNE1Q8NF91 AL359893.1-201ENST00000447628 1580 ntBASIC0.65□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms