Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC034102.8-201ENST00000615146 484 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC016717.2-201ENST00000609089 5141 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 AC007342.9-201ENST00000623877 1385 ntBASIC2.6□□□□□ -1.99
CCDC112Q8NEF3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 RSL24D1P4-201ENST00000400938 484 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AL139039.1-201ENST00000401900 692 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 MTND4LP20-201ENST00000402379 270 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 OOSP1P1-201ENST00000423265 274 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 UBE2V2P3-201ENST00000433562 437 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 MTND2P21-201ENST00000436242 1042 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC104435.1-201ENST00000483483 166 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 OR5H5P-201ENST00000503164 928 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 RNU4-29P-201ENST00000515943 174 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AP000790.1-201ENST00000528891 737 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AP000889.2-201ENST00000532684 490 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC007115.1-201ENST00000546853 234 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC103810.1-201ENST00000579873 453 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC025588.3-201ENST00000604182 274 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC136601.2-201ENST00000604356 474 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 HSPE1P7-201ENST00000604681 321 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC018618.2-201ENST00000604770 446 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC013468.1-201ENST00000608680 598 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 MIR6817-201ENST00000615588 66 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.59□□□□□ -1.99
CCDC112Q8NEF3 AC104446.1-201ENST00000613728 1321 ntBASIC2.59□□□□□ -2
CCDC112Q8NEF3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CCDC112Q8NEF3 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
CCDC112Q8NEF3 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC112Q8NEF3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 SNORA51.11-201ENST00000384442 131 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 AC092447.6-201ENST00000414578 210 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 XKRY2-201ENST00000442362 1093 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 TRBV26-201ENST00000456572 344 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 OR52A4P-203ENST00000498233 1014 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 RNU6-202P-201ENST00000515998 96 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 AC234778.2-201ENST00000566241 354 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 MIR3945-201ENST00000581853 98 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 AL138880.2-201ENST00000616214 239 ntBASIC2.58□□□□□ -2
CCDC112Q8NEF3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.58□□□□□ -2
CCDC112Q8NEF3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC112Q8NEF3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC112Q8NEF3 RNU6-543P-201ENST00000362576 108 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 RPS3AP9-201ENST00000417027 792 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 DPPA3P1-201ENST00000448050 469 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 AL359385.1-201ENST00000456509 365 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 SETP11-201ENST00000473027 690 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 LINC00888-204ENST00000487386 421 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC112Q8NEF3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 GZMAP1-201ENST00000503054 631 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC112Q8NEF3 XKRY-201ENST00000510392 1100 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 CDC42P4-201ENST00000510507 563 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 RN7SKP24-201ENST00000515888 284 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 RN7SKP40-201ENST00000517211 242 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 OR10V3P-201ENST00000525712 725 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC112Q8NEF3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 AC105137.2-201ENST00000569073 466 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.57□□□□□ -2
CCDC112Q8NEF3 AC024560.3-201ENST00000608482 349 ntBASIC2.57□□□□□ -2
CCDC112Q8NEF3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC112Q8NEF3 MIR6895-201ENST00000613497 78 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms