Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 BX890604.2-201ENST00000427883 474 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC009961.2-201ENST00000435771 251 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC069285.2-201ENST00000440210 275 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 MTND6P13-201ENST00000443510 523 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 BTF3P5-201ENST00000457252 467 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 RPS4XP10-201ENST00000465034 731 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 RN7SL809P-201ENST00000482040 297 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 RNU6-488P-201ENST00000515918 99 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AP000790.1-201ENST00000528891 737 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC022878.1-201ENST00000530684 149 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNE4Q8N205 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 BNIP3P23-201ENST00000599655 511 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL137849.1-201ENST00000604767 169 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC097468.3-201ENST00000607956 456 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL136221.1-201ENST00000621449 509 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 MIR6852-201ENST00000621699 66 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 AC055839.1-201ENST00000634467 498 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SYNE4Q8N205 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SYNE4Q8N205 AL022578.1-201ENST00000439330 1433 ntBASIC4.7□□□□□ -1.66
SYNE4Q8N205 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNE4Q8N205 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SYNE4Q8N205 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNE4Q8N205 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 RNU6-483P-201ENST00000384088 108 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 RNU6-1122P-201ENST00000384449 107 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AL122016.1-201ENST00000403365 367 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 RPS7P15-201ENST00000415804 584 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AL158156.1-201ENST00000422509 473 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 KCTD9P3-201ENST00000434597 1169 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 LSM1P1-201ENST00000438629 273 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 MTCO3P20-201ENST00000454926 688 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC022364.2-201ENST00000457963 554 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC087312.1-201ENST00000471411 480 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC018710.1-201ENST00000506509 158 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 RNU6-150P-201ENST00000516237 95 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC090136.1-201ENST00000520009 240 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 MIR544B-201ENST00000582372 78 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 MIR4307-201ENST00000582802 84 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC103710.1-201ENST00000610003 901 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC110994.2-201ENST00000635481 492 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SYNE4Q8N205 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SYNE4Q8N205 NEAT1-202ENST00000501122 22743 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
SYNE4Q8N205 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AL049781.1-201ENST00000623195 3585 ntBASIC4.69□□□□□ -1.66
SYNE4Q8N205 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SYNE4Q8N205 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC025125.1-201ENST00000624743 1922 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC117529.2-201ENST00000512159 2068 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SYNE4Q8N205 SNRPEP3-201ENST00000338402 276 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 U8.3-201ENST00000363321 132 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 RNY4P34-201ENST00000364779 95 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 MIR128-1-201ENST00000384921 82 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 ATP5A1P2-201ENST00000412323 255 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 JKAMPP1-201ENST00000413804 919 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 HMGB3P20-201ENST00000417997 600 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AL445669.1-201ENST00000426743 755 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC007677.1-201ENST00000445757 515 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 RPS3AP46-201ENST00000448352 682 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC115115.1-201ENST00000449927 248 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 SNRPFP4-201ENST00000456366 242 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 MEMO1P3-201ENST00000459811 302 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC084198.1-201ENST00000477747 402 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC026412.2-201ENST00000512270 1075 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC006499.2-201ENST00000513470 337 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms