Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX5Q8N196 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX5Q8N196 RPS11P1-201ENST00000451072 473 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 RPS29P33-201ENST00000456717 146 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 AC068781.1-201ENST00000488231 618 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 RPS27AP13-201ENST00000498403 237 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.66□□□□□ -1.5
SIX5Q8N196 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.66□□□□□ -1.5
SIX5Q8N196 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.66□□□□□ -1.5
SIX5Q8N196 RNU6-475P-201ENST00000516073 104 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 RN7SKP147-201ENST00000517154 244 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 AC092490.3-201ENST00000545370 572 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 HSBP1P1-201ENST00000555205 166 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.66□□□□□ -1.5
SIX5Q8N196 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.66□□□□□ -1.5
SIX5Q8N196 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SIX5Q8N196 RN7SL52P-201ENST00000584271 284 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 AC067852.4-201ENST00000590314 478 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 AC087783.2-201ENST00000605070 562 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 RN7SL722P-201ENST00000617780 284 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 RN7SL565P-201ENST00000618246 284 ntBASIC5.66□□□□□ -1.5
SIX5Q8N196 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SIX5Q8N196 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIX5Q8N196 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIX5Q8N196 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SIX5Q8N196 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
SIX5Q8N196 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIX5Q8N196 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIX5Q8N196 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SIX5Q8N196 AC138393.1-203ENST00000327086 343 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 RNU6-1059P-201ENST00000363752 98 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 MIR517A-201ENST00000385001 87 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 RNU6-837P-201ENST00000391056 108 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 AL133388.1-201ENST00000404509 287 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.65□□□□□ -1.5
SIX5Q8N196 RNU2-23P-201ENST00000410545 195 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX5Q8N196 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SIX5Q8N196 NOTCH2P1-201ENST00000443481 624 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.65□□□□□ -1.5
SIX5Q8N196 AL590399.6-201ENST00000446396 307 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX5Q8N196 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.65□□□□□ -1.5
SIX5Q8N196 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.65□□□□□ -1.5
SIX5Q8N196 AC092436.3-201ENST00000511788 257 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 RN7SKP258-201ENST00000517151 304 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 IGLV3-24-201ENST00000517477 197 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.65□□□□□ -1.5
SIX5Q8N196 AC109446.1-201ENST00000566172 220 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 MIR4311-201ENST00000580794 100 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 AC109583.2-201ENST00000617367 129 ntBASIC5.65□□□□□ -1.5
SIX5Q8N196 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX5Q8N196 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SIX5Q8N196 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.65□□□□□ -1.5
SIX5Q8N196 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
SIX5Q8N196 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SIX5Q8N196 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
SIX5Q8N196 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIX5Q8N196 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SIX5Q8N196 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.65□□□□□ -1.51
SIX5Q8N196 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.65□□□□□ -1.51
SIX5Q8N196 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.65□□□□□ -1.51
SIX5Q8N196 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SIX5Q8N196 THAP12P5-201ENST00000405864 2275 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
SIX5Q8N196 AC091812.1-201ENST00000432235 1948 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AC139769.1-204ENST00000472297 1931 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
SIX5Q8N196 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SIX5Q8N196 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SIX5Q8N196 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SIX5Q8N196 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SIX5Q8N196 SNORA51.8-201ENST00000384234 132 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AL133482.1-201ENST00000415988 498 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AC243428.1-201ENST00000421099 264 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 EIF4EP1-201ENST00000422311 642 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AC245028.1-201ENST00000423259 256 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AC093655.2-201ENST00000425735 631 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SIX5Q8N196 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.64□□□□□ -1.51
SIX5Q8N196 snoU13.20-201ENST00000459180 104 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 RPL9P32-201ENST00000464118 620 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 GMPSP1-201ENST00000514075 579 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AC126177.3-201ENST00000551839 688 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 RPL10P14-201ENST00000565265 298 ntBASIC5.64□□□□□ -1.51
SIX5Q8N196 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.64□□□□□ -1.51
SIX5Q8N196 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.64□□□□□ -1.51
SIX5Q8N196 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms