Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 BOLA3P3-201ENST00000505182 232 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 GMPSP1-201ENST00000514075 579 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 SNORA74D-201ENST00000516404 141 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC087373.1-201ENST00000524920 491 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 NDUFS5P6-201ENST00000529136 295 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 NBEAP1-201ENST00000554452 979 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC245036.5-201ENST00000596330 847 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC128687.1-201ENST00000605304 619 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC018755.4-201ENST00000619715 454 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AP001002.2-201ENST00000625137 386 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC087821.2-201ENST00000637086 450 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 MFSD8-245ENST00000641743 948 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 HMGB1P5-201ENST00000255320 642 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 RNU6-492P-201ENST00000363035 104 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 RNU6-1066P-201ENST00000363573 105 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 SNORD65.1-201ENST00000390889 71 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 MTCO1P56-201ENST00000401674 224 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC092447.6-201ENST00000414578 210 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 MTCO3P1-205ENST00000422088 832 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC087499.2-201ENST00000432861 149 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AL135938.1-201ENST00000443141 297 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 RPS20P24-201ENST00000457473 361 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC080014.1-201ENST00000496877 1201 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC096751.1-202ENST00000502691 1067 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AL451007.1-201ENST00000595491 289 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AL445435.1-201ENST00000604232 665 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AC092954.1-201ENST00000609121 445 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AP001521.1-201ENST00000609150 300 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 AP000720.1-201ENST00000625091 483 ntBASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC65Q8IXS2 ZNF833P-201ENST00000424938 1494 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 GNG5P1-201ENST00000255500 204 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 RNU6-1300P-201ENST00000391046 108 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 TMSB4XP8-201ENST00000402089 135 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL138827.1-201ENST00000402666 306 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 TMSB4XP6-201ENST00000415187 135 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 TMSB4XP1-201ENST00000424567 135 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC079780.1-201ENST00000428259 207 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC012497.1-201ENST00000429392 575 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC093155.1-201ENST00000440164 826 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC079776.3-201ENST00000450665 370 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL049829.1-201ENST00000465411 156 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 RNU6-27P-201ENST00000516146 107 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 RNU6-1028P-201ENST00000517164 93 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC027309.2-201ENST00000520566 192 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 DEFB130C-202ENST00000530001 230 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AL133271.1-201ENST00000538229 291 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC126177.3-201ENST00000551839 688 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 MTCYBP27-201ENST00000555160 670 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 CYCSP39-201ENST00000565821 309 ntBASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC65Q8IXS2 BNIP3P22-201ENST00000593399 556 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms