Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC026464.5-201ENST00000562497 722 ntBASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 FRG2DP-202ENST00000566967 323 ntBASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 TVP23CP2-201ENST00000571473 623 ntBASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 AC008521.1-201ENST00000587471 187 ntBASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 AC092807.2-201ENST00000609367 243 ntBASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 AC010632.3-201ENST00000611377 369 ntBASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPAS4Q8IUM7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 RNU5A-1-201ENST00000362698 116 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.133-201ENST00000363428 110 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 SNORA70.6-201ENST00000383934 134 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 MT-TR-201ENST00000387439 65 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 MIR298-201ENST00000401212 88 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AL356057.3-201ENST00000402607 340 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC068287.1-201ENST00000430283 295 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 RPL19P16-201ENST00000433839 588 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC091390.1-201ENST00000433904 331 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC099670.2-201ENST00000435130 321 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 RNU6-123P-201ENST00000516163 102 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC008489.1-201ENST00000524271 483 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AP006587.4-201ENST00000526053 529 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AP000763.2-201ENST00000540641 163 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 FAM60BP-201ENST00000578364 658 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC100830.2-201ENST00000581636 240 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 MIR4420-201ENST00000583944 77 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 SNRPGP15-201ENST00000600149 222 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AL138960.1-201ENST00000613838 513 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AL133216.2-202ENST00000634512 349 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 AC007823.1-201ENST00000569932 1566 ntBASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPAS4Q8IUM7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC093671.1-201ENST00000624981 2929 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC009812.4-201ENST00000569134 1805 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 RNU6-522P-201ENST00000364497 107 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 SNORA62-201ENST00000365493 153 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 RNU6-1279P-201ENST00000383917 103 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 Y_RNA.605-201ENST00000410577 105 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC080125.1-201ENST00000414888 684 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 RPL7P10-201ENST00000417407 739 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC104058.1-201ENST00000448028 297 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC090804.1-201ENST00000448870 490 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AURKAPS2-201ENST00000454983 333 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC116533.1-201ENST00000459748 321 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC106872.2-201ENST00000494303 480 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 MTCO1P29-201ENST00000496868 288 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 TRBVA-201ENST00000498804 316 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC005741.1-201ENST00000511094 432 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC098976.1-201ENST00000513014 541 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 RN7SKP60-201ENST00000516985 239 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 SNORA31.22-201ENST00000517204 135 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms