Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDB1Q86U70 AC010591.1-201ENST00000603941 649 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AP001330.4-201ENST00000604350 154 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB1Q86U70 MIR6130-201ENST00000619419 109 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 AC091965.5-201ENST00000624785 342 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 MIR3974-201ENST00000637126 96 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDB1Q86U70 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB1Q86U70 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
LDB1Q86U70 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB1Q86U70 TAB3P1-202ENST00000452645 1634 ntBASIC3.51□□□□□ -1.85
LDB1Q86U70 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB1Q86U70 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB1Q86U70 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB1Q86U70 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.51□□□□□ -1.85
LDB1Q86U70 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB1Q86U70 RPS4XP5-202ENST00000449995 1334 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB1Q86U70 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
LDB1Q86U70 RNU6-50P-201ENST00000362356 103 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 Y_RNA.97-201ENST00000363094 102 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB1Q86U70 AL359837.1-201ENST00000381357 287 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 SNORA5A-201ENST00000384111 134 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AL136372.1-201ENST00000403060 228 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AL359704.1-201ENST00000411586 781 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 RPL7P8-201ENST00000411964 730 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB1Q86U70 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB1Q86U70 AL389915.1-201ENST00000422463 466 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB1Q86U70 AL158071.1-201ENST00000430315 461 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC109583.1-201ENST00000432156 268 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB1Q86U70 LARP1BP3-201ENST00000437229 869 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB1Q86U70 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB1Q86U70 RPL36AP33-201ENST00000450395 310 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AP1S2P1-201ENST00000457344 379 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 CEACAMP4-201ENST00000457676 421 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 MTND3P7-201ENST00000474435 343 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AP001086.1-201ENST00000494882 321 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 RPL7P47-201ENST00000497299 556 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 SNORA31.8-201ENST00000516327 108 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 TRMT10BP1-201ENST00000519377 943 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB1Q86U70 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB1Q86U70 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB1Q86U70 AC091489.2-201ENST00000566263 604 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC067852.3-201ENST00000589177 561 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AP001429.1-201ENST00000602568 530 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC091965.4-201ENST00000607691 587 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC022149.2-201ENST00000621061 203 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC009902.3-201ENST00000606235 2172 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 AC012321.1-201ENST00000561622 1588 ntBASIC3.5□□□□□ -1.85
LDB1Q86U70 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB1Q86U70 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB1Q86U70 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB1Q86U70 CCT4P2-201ENST00000233836 1548 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LDB1Q86U70 AC011460.1-201ENST00000636268 1834 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 SNORA62.3-201ENST00000365110 153 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LDB1Q86U70 RNA5SP129-201ENST00000410276 118 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 MTND1P21-201ENST00000412991 285 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB1Q86U70 SYF2P2-201ENST00000417620 583 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC068533.1-201ENST00000418542 415 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB1Q86U70 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB1Q86U70 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB1Q86U70 OR4K11P-201ENST00000431829 904 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 HMGB1P12-201ENST00000438594 598 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB1Q86U70 MRPS31P2-201ENST00000451581 518 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 KATNBL1P6-201ENST00000453433 915 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC007967.1-201ENST00000455422 1159 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB1Q86U70 DSTNP2-201ENST00000504533 515 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB1Q86U70 RN7SKP13-201ENST00000515933 244 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 RNU2-27P-201ENST00000516185 142 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 RNA5SP468-201ENST00000516782 93 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LDB1Q86U70 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB1Q86U70 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB1Q86U70 ROCK1P1-201ENST00000573767 549 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC060771.1-201ENST00000582031 164 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC012443.1-201ENST00000605605 231 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 AC092354.1-201ENST00000606057 376 ntBASIC3.49□□□□□ -1.85
LDB1Q86U70 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB1Q86U70 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB1Q86U70 AL391261.4-201ENST00000616012 481 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms