Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 TRIAP1P1-201ENST00000427062 225 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 AP000648.3-201ENST00000623539 4507 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC092326.2-201ENST00000624772 1561 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 DNAJC19P6-201ENST00000401853 280 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC109486.1-201ENST00000486833 374 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 RNU2-58P-201ENST00000516403 183 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC087241.2-201ENST00000535801 324 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 MYL12BP1-201ENST00000569826 507 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.35□□□□□ -2.19
VPS13CQ709C8 AC092447.7-201ENST00000422212 1621 ntBASIC1.35□□□□□ -2.19
VPS13CQ709C8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.34□□□□□ -2.19
VPS13CQ709C8 RN7SL793P-201ENST00000583259 296 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 AL031274.2-201ENST00000599419 203 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS13CQ709C8 AC093775.1-201ENST00000624154 1868 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
VPS13CQ709C8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
VPS13CQ709C8 CDC27P3-201ENST00000635418 1910 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
VPS13CQ709C8 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.34□□□□□ -2.19
VPS13CQ709C8 AL035405.1-201ENST00000400795 710 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
VPS13CQ709C8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 AL021397.1-201ENST00000451806 248 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 HMGB1P47-201ENST00000511281 589 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 Y_RNA.681-201ENST00000516445 113 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 AC008126.1-201ENST00000549019 480 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
VPS13CQ709C8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
VPS13CQ709C8 AC092881.1-201ENST00000638218 2733 ntBASIC1.34□□□□□ -2.19
VPS13CQ709C8 MIR3074-201ENST00000384885 81 ntBASIC1.34□□□□□ -2.2
VPS13CQ709C8 PAICSP7-201ENST00000419829 962 ntBASIC1.34□□□□□ -2.2
VPS13CQ709C8 UBE2V1P6-201ENST00000430840 422 ntBASIC1.34□□□□□ -2.2
VPS13CQ709C8 NIFKP8-201ENST00000560500 874 ntBASIC1.34□□□□□ -2.2
VPS13CQ709C8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.34□□□□□ -2.2
VPS13CQ709C8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
VPS13CQ709C8 AC068700.1-201ENST00000565862 3754 ntBASIC1.34□□□□□ -2.2
VPS13CQ709C8 SNORD48-201ENST00000364953 64 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 RNY1P4-201ENST00000384595 115 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 SRIP3-201ENST00000413200 219 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 BNIP3P2-201ENST00000441221 577 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 AC244505.5-201ENST00000443639 207 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS13CQ709C8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS13CQ709C8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13CQ709C8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
VPS13CQ709C8 RNU6-1032P-201ENST00000384100 107 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 RNU6-174P-201ENST00000410406 106 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.33□□□□□ -2.2
VPS13CQ709C8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13CQ709C8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS13CQ709C8 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 AC024614.2-201ENST00000577584 372 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VPS13CQ709C8 SNORA51.12-201ENST00000384448 134 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 RPL7P46-201ENST00000425129 740 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS13CQ709C8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.33□□□□□ -2.2
VPS13CQ709C8 AL389895.1-201ENST00000554127 252 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 AC012078.1-201ENST00000405035 1646 ntBASIC1.33□□□□□ -2.2
VPS13CQ709C8 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 KATNBL1P3-201ENST00000443475 909 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 GLYCAM1-201ENST00000546596 285 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 ABI1P1-201ENST00000603375 1120 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC091895.1-201ENST00000624494 256 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VPS13CQ709C8 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC002524.1-201ENST00000411687 547 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC011979.1-201ENST00000472300 483 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS13CQ709C8 AL359273.1-201ENST00000510918 627 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 OR4G1P-203ENST00000641984 1631 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VPS13CQ709C8 RNU4-13P-201ENST00000364019 141 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 Y_RNA.458-201ENST00000384240 102 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 RNU1-139P-201ENST00000391307 165 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 MTCO3P30-201ENST00000426425 670 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC107294.3-201ENST00000609211 526 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 PWAR6-201ENST00000552334 4618 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 AC012321.1-201ENST00000561622 1588 ntBASIC1.32□□□□□ -2.2
VPS13CQ709C8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms