Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AL353691.1-201ENST00000451332 387 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 OR6K1P-201ENST00000456766 971 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 RNA5SP269-201ENST00000459032 137 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC017015.1-201ENST00000477387 286 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC082651.2-201ENST00000496833 166 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC034159.1-201ENST00000513885 583 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC013828.2-201ENST00000532487 235 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 OR6C73P-201ENST00000546432 358 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 ZNF192P1-203ENST00000565888 810 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 MIR3186-201ENST00000577404 85 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC090615.1-201ENST00000577519 154 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC040168.1-201ENST00000623594 991 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 GABPAP-201ENST00000419271 1356 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AL049780.3-201ENST00000624612 1583 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AF127577.6-201ENST00000623352 2191 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 RNY4P24-201ENST00000362735 96 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 U3.4-201ENST00000363352 213 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 MIR200C-201ENST00000384980 68 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 MTCO1P17-201ENST00000411522 491 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC245052.5-201ENST00000416320 649 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 RPL37P21-201ENST00000435890 276 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC091862.1-201ENST00000438016 1100 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 Z95327.1-201ENST00000446082 482 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 HMGB1P15-201ENST00000453854 435 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 RN7SL594P-201ENST00000470590 287 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC084357.1-201ENST00000473404 255 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AP000797.1-201ENST00000478870 387 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC106707.2-201ENST00000484182 374 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 SAP18P1-201ENST00000512058 390 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 OR4R3P-201ENST00000525084 838 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 BNIP3P23-201ENST00000599655 511 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC073544.2-201ENST00000601155 540 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC004853.1-201ENST00000604902 698 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 U4.6-201ENST00000621618 127 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC139792.2-201ENST00000624218 587 ntBASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SYNE3Q6ZMZ3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AL021368.2-201ENST00000606125 5352 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC068647.1-201ENST00000489539 2265 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 FGF7P2-201ENST00000332473 296 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 FRG1CP-201ENST00000358464 769 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 U8.14-201ENST00000390843 143 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AL136116.1-201ENST00000403591 381 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC068533.1-201ENST00000418542 415 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AL513174.1-201ENST00000423182 629 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 HSPD1P21-201ENST00000436541 245 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 GDI2P2-201ENST00000445131 608 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC023424.2-201ENST00000493479 777 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC034222.1-201ENST00000494052 532 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 COX7A2P2-201ENST00000505291 250 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC091435.1-201ENST00000505442 584 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC010424.1-201ENST00000506336 297 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC023141.12-201ENST00000512399 199 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 MTCO2P32-201ENST00000514865 403 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 FABP5P5-201ENST00000515537 406 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 RNU2-58P-201ENST00000516403 183 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 SNORA70.18-201ENST00000516696 98 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 RNU6-714P-201ENST00000516963 103 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 AC024224.1-201ENST00000538284 609 ntBASIC4.13□□□□□ -1.75
SYNE3Q6ZMZ3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms