Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC007785.2-201ENST00000598627 1916 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AL672167.1-206ENST00000356293 943 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 RNA5SP139-201ENST00000364340 117 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 MIR23B-201ENST00000384832 97 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 MIR134-201ENST00000385258 73 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 RN7SKP140-201ENST00000411196 284 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 HMGN1P24-201ENST00000412282 298 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 RPL23AP69-201ENST00000431134 458 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 RPL35AP22-201ENST00000436855 335 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 RPL23AP58-201ENST00000440453 469 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 RPS4XP4-201ENST00000443195 763 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AL135752.1-201ENST00000479477 471 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 UBTFL10-201ENST00000528532 562 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC023161.2-201ENST00000551218 780 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC090888.1-201ENST00000561335 1141 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC090877.1-201ENST00000561418 344 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 HMGB1P6-201ENST00000569046 646 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC006557.5-201ENST00000603126 811 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC144521.1-201ENST00000607148 956 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC103710.4-201ENST00000609301 899 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC010133.1-201ENST00000615809 842 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC006927.4-201ENST00000639187 543 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 RLIMP1-201ENST00000339626 1680 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.26□□□□□ -1.89
C11orf88Q6PI97 SDAD1P2-201ENST00000441308 2028 ntBASIC3.26□□□□□ -1.89
C11orf88Q6PI97 AC091564.4-201ENST00000533934 2194 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL049641.1-201ENST00000441055 1948 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 RNU6-157P-201ENST00000383957 107 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC119751.3-201ENST00000399720 670 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 PIGPP2-201ENST00000411569 458 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 HSPE1P12-201ENST00000412576 301 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 MTND1P21-201ENST00000412991 285 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL008987.1-201ENST00000415528 237 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 MTCO2P21-201ENST00000419780 677 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC006989.1-201ENST00000427212 131 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 TXNL1P1-201ENST00000429528 554 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 RANP8-201ENST00000444720 713 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 TPT1P14-201ENST00000448018 505 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC006539.3-201ENST00000454258 129 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL109741.2-201ENST00000455561 343 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 ATG12P2-201ENST00000456830 416 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 SETP11-201ENST00000473027 690 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC026784.1-201ENST00000507986 352 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC093809.1-201ENST00000509155 340 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 SAP18P1-201ENST00000512058 390 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 NPM1P41-201ENST00000512920 831 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC006130.2-201ENST00000586202 326 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC061975.8-201ENST00000587058 721 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC006116.10-201ENST00000591836 581 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC008739.3-201ENST00000603262 127 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL031281.1-201ENST00000604049 488 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC097468.3-201ENST00000607956 456 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC072039.2-201ENST00000608883 439 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 RMST_8.1-201ENST00000610287 165 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AC092106.3-201ENST00000611308 722 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL139418.1-201ENST00000613613 177 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 TUG1_2.1-201ENST00000614234 87 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 MIR6875-201ENST00000617506 72 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 AL391262.2-201ENST00000622466 494 ntBASIC3.25□□□□□ -1.89
C11orf88Q6PI97 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
C11orf88Q6PI97 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.24□□□□□ -1.89
C11orf88Q6PI97 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms