Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PRPF40BQ6NWY9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.128-201ENST00000363391 112 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 U3.11-201ENST00000364476 212 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 RNA5SP366-201ENST00000365454 123 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-1297P-201ENST00000384415 104 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 MIR558-201ENST00000384920 94 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 MIR514A2-201ENST00000385131 88 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 MIR514A3-201ENST00000385132 88 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 RNU2-15P-201ENST00000410692 191 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 BEND7P1-201ENST00000422058 457 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 RNU7-182P-201ENST00000459009 62 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 TRMT10BP1-201ENST00000519377 943 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 RPL7P20-201ENST00000520308 745 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AC092470.1-201ENST00000546187 132 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AC006130.2-201ENST00000586202 326 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AC025588.3-201ENST00000604182 274 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AL121655.1-201ENST00000605811 308 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 AC004908.2-201ENST00000609090 574 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 MIR3653-201ENST00000625572 110 ntBASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
PRPF40BQ6NWY9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RNU1-83P-201ENST00000363426 164 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.422-201ENST00000384054 114 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-738P-201ENST00000384531 106 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-831P-201ENST00000384548 107 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 MIR19A-201ENST00000384878 82 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 AP000580.1-201ENST00000404439 358 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 HMGN1P24-201ENST00000412282 298 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 MED13P1-201ENST00000428342 171 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RPL23AP93-201ENST00000440847 484 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RPL7P42-201ENST00000481005 679 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 AC025164.1-201ENST00000496249 478 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.665-201ENST00000516177 98 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RNU7-51P-201ENST00000516560 62 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 FRG2DP-202ENST00000566967 323 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 MIR3671-201ENST00000580455 88 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 AC040896.1-201ENST00000613819 479 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 SNX18P1Y-201ENST00000616231 511 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 AL359922.3-201ENST00000624779 1670 ntBASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PRPF40BQ6NWY9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 DHX9P1-201ENST00000436565 3076 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-1013P-201ENST00000384180 107 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 MIR559-201ENST00000385188 96 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AL022722.2-201ENST00000402519 180 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 OR6C66P-201ENST00000414917 930 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 MRPL48P1-201ENST00000445390 636 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AC020893.1-201ENST00000502452 580 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AC116312.1-201ENST00000606841 314 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 Z98200.1-201ENST00000607298 470 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AL355802.3-201ENST00000607571 545 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 MIR492-201ENST00000638676 116 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms