Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.39□□□□□ -2.03
NUP188Q5SRE5 AC104986.1-201ENST00000517978 436 ntBASIC2.39□□□□□ -2.03
NUP188Q5SRE5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.39□□□□□ -2.03
NUP188Q5SRE5 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.39□□□□□ -2.03
NUP188Q5SRE5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NUP188Q5SRE5 AC090953.1-201ENST00000604305 1092 ntBASIC2.39□□□□□ -2.03
NUP188Q5SRE5 AC019159.1-201ENST00000605094 187 ntBASIC2.39□□□□□ -2.03
NUP188Q5SRE5 XKRY2-202ENST00000623874 1581 ntBASIC2.39□□□□□ -2.03
NUP188Q5SRE5 XKRY-202ENST00000624960 1581 ntBASIC2.39□□□□□ -2.03
NUP188Q5SRE5 AC012321.1-201ENST00000561622 1588 ntBASIC2.38□□□□□ -2.03
NUP188Q5SRE5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NUP188Q5SRE5 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NUP188Q5SRE5 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
NUP188Q5SRE5 RSL24D1P2-201ENST00000445584 366 ntBASIC2.38□□□□□ -2.03
NUP188Q5SRE5 AL157827.1-201ENST00000447622 132 ntBASIC2.38□□□□□ -2.03
NUP188Q5SRE5 MTND4LP22-201ENST00000508209 276 ntBASIC2.38□□□□□ -2.03
NUP188Q5SRE5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.38□□□□□ -2.03
NUP188Q5SRE5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP188Q5SRE5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.38□□□□□ -2.03
NUP188Q5SRE5 MIR5089-201ENST00000580047 84 ntBASIC2.38□□□□□ -2.03
NUP188Q5SRE5 AL159169.2-201ENST00000610061 1269 ntBASIC2.38□□□□□ -2.03
NUP188Q5SRE5 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
NUP188Q5SRE5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AL358075.3-201ENST00000426289 226 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 HMGB1P27-201ENST00000431429 603 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AL138799.3-201ENST00000438968 350 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC011890.2-201ENST00000613393 294 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AL353748.2-201ENST00000622148 471 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AP000553.5-201ENST00000641933 54 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 VN1R31P-201ENST00000417498 730 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC234782.4-201ENST00000417646 1048 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 UBE2V1P5-201ENST00000440070 405 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 ELOCP10-201ENST00000440624 327 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AL590664.1-201ENST00000448065 339 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC025033.1-201ENST00000463883 194 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 RPL23AP55-201ENST00000498163 452 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 RNA5SP102-201ENST00000516865 106 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC098848.2-201ENST00000588023 330 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 ELOCP34-201ENST00000604436 327 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AC092954.1-201ENST00000609121 445 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 MIR8081-201ENST00000611533 95 ntBASIC2.37□□□□□ -2.03
NUP188Q5SRE5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 RNU6-53P-201ENST00000365367 106 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 RNU6-603P-201ENST00000411403 107 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 RPS3AP9-201ENST00000417027 792 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AC099336.2-201ENST00000422457 254 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 RPL7P46-201ENST00000425129 740 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 PIGFP3-201ENST00000441918 722 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 ATP5J2P3-201ENST00000451550 258 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 RPL12P25-201ENST00000455592 494 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 PPP1R2P5-201ENST00000457256 603 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 RNU1-123P-201ENST00000458950 160 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AC073901.1-201ENST00000462471 408 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AC012170.1-201ENST00000495139 359 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 AC103988.1-201ENST00000566382 2177 ntBASIC2.36□□□□□ -2.03
NUP188Q5SRE5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NUP188Q5SRE5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP188Q5SRE5 HIGD1AP11-201ENST00000438361 280 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 CLIC4P1-201ENST00000453177 535 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AC092451.1-201ENST00000480211 153 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AC109486.1-201ENST00000486833 374 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AC079804.2-201ENST00000490376 200 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 PSMA3P-201ENST00000555485 635 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 ZNF192P1-203ENST00000565888 810 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AC103987.3-201ENST00000582071 292 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 PVT1_3.1-201ENST00000620853 95 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AL359740.1-201ENST00000624340 592 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 MIR4278-201ENST00000636094 69 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 CKAP2P1-201ENST00000555477 2049 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 MTND5P3-201ENST00000438536 1800 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 AC008568.2-201ENST00000623862 2313 ntBASIC2.35□□□□□ -2.03
NUP188Q5SRE5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 RNA5SP138-201ENST00000365098 114 ntBASIC2.34□□□□□ -2.03
NUP188Q5SRE5 AL035405.1-201ENST00000400795 710 ntBASIC2.34□□□□□ -2.03
NUP188Q5SRE5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 AC017099.1-201ENST00000448261 1028 ntBASIC2.34□□□□□ -2.03
NUP188Q5SRE5 RPL7P31-201ENST00000450192 724 ntBASIC2.34□□□□□ -2.03
NUP188Q5SRE5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.34□□□□□ -2.03
NUP188Q5SRE5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms