Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MTND2P14-201ENST00000482139 351 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 RPS15AP36-201ENST00000492022 382 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 RNU6-928P-201ENST00000516876 104 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AC087369.1-201ENST00000520775 996 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN1BQ07699 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN1BQ07699 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN1BQ07699 ACTR3BP3-201ENST00000565577 979 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN1BQ07699 RPL23AP84-201ENST00000571193 464 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 MIR4700-201ENST00000578311 74 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 GLUD1P4-201ENST00000590914 418 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
SCN1BQ07699 AL606490.9-201ENST00000603331 271 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 BCRP9-201ENST00000605312 388 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN1BQ07699 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
SCN1BQ07699 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN1BQ07699 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN1BQ07699 OR52H1-202ENST00000641796 1061 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN1BQ07699 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.24□□□□□ -1.89
SCN1BQ07699 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN1BQ07699 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN1BQ07699 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.24□□□□□ -1.89
SCN1BQ07699 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCN1BQ07699 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN1BQ07699 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
SCN1BQ07699 MTND5P33-201ENST00000571250 1450 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AL391994.1-201ENST00000254724 282 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 SPRR2C-201ENST00000290702 219 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SCN1BQ07699 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 SAR1AP2-201ENST00000392696 594 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 RPL21P17-201ENST00000397467 475 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC110754.1-201ENST00000399740 601 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 SPA17P1-201ENST00000416656 452 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.23□□□□□ -1.89
SCN1BQ07699 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AL390023.1-201ENST00000428836 262 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 MTND5P27-201ENST00000428871 1720 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN1BQ07699 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN1BQ07699 RPL23AP69-201ENST00000431134 458 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN1BQ07699 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.23□□□□□ -1.89
SCN1BQ07699 RPL21P8-201ENST00000465083 535 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 RPS23P7-201ENST00000466210 444 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 LARP1BP2-201ENST00000486594 519 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 LTV1P1-201ENST00000510683 1237 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN1BQ07699 MTCO1P35-201ENST00000515270 228 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 RNA5SP208-201ENST00000516156 78 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC068657.1-201ENST00000520807 306 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 EEF1A1P37-201ENST00000522748 715 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 MTCO1P49-201ENST00000523429 802 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AP003461.1-201ENST00000528866 78 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SCN1BQ07699 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN1BQ07699 AL121766.1-201ENST00000547436 487 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN1BQ07699 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AC090888.2-201ENST00000559765 1144 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC006960.3-201ENST00000561845 705 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AL845331.3-202ENST00000562856 261 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN1BQ07699 AC005951.1-201ENST00000576706 485 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC053481.4-201ENST00000583164 216 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC008507.1-201ENST00000587506 734 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AF038458.1-201ENST00000588406 262 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 AC079089.3-201ENST00000603094 673 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCN1BQ07699 AC233263.6-201ENST00000631132 1963 ntBASIC3.23□□□□□ -1.89
SCN1BQ07699 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN1BQ07699 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN1BQ07699 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCN1BQ07699 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN1BQ07699 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SCN1BQ07699 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCN1BQ07699 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCN1BQ07699 AC007066.1-201ENST00000392902 381 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 TXNP7-201ENST00000406296 293 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN1BQ07699 HMGB3P20-201ENST00000417997 600 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC012498.1-201ENST00000424037 437 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC091390.3-201ENST00000426478 338 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 GOT2P5-201ENST00000433995 546 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 NDUFB1P1-201ENST00000435191 180 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
SCN1BQ07699 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN1BQ07699 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN1BQ07699 AC009220.1-201ENST00000451614 275 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms