Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AP002907.1-201ENST00000606361 1430 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 SNORA31-201ENST00000362607 130 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 U3.29-201ENST00000391296 212 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 RNA5SP293-201ENST00000410527 113 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 HMGB3P23-201ENST00000414981 585 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 AIMP1P1-201ENST00000418670 937 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 AL139281.1-201ENST00000422120 335 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.39□□□□□ -1.87
GABPAQ06546 USP9YP11-201ENST00000427537 717 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.39□□□□□ -1.87
GABPAQ06546 MTND2P20-201ENST00000440805 661 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 RPS24P13-201ENST00000442520 397 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 ELOCP13-201ENST00000443934 329 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.39□□□□□ -1.87
GABPAQ06546 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.39□□□□□ -1.87
GABPAQ06546 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
GABPAQ06546 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 NIPA2P5-201ENST00000452282 464 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 USP9YP34-201ENST00000453983 808 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 MTND1P16-201ENST00000465177 898 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 RPL23AP55-201ENST00000498163 452 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GABPAQ06546 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.39□□□□□ -1.87
GABPAQ06546 AC006390.1-201ENST00000508068 283 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.39□□□□□ -1.87
GABPAQ06546 AC109445.1-201ENST00000512356 383 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.39□□□□□ -1.87
GABPAQ06546 RNU6-311P-201ENST00000516224 102 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.39□□□□□ -1.87
GABPAQ06546 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.39□□□□□ -1.87
GABPAQ06546 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.39□□□□□ -1.87
GABPAQ06546 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.39□□□□□ -1.87
GABPAQ06546 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.39□□□□□ -1.87
GABPAQ06546 AC022662.1-201ENST00000580252 331 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 MIR3162-201ENST00000581818 82 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 RPL12P50-201ENST00000603116 116 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 RPL23AP92-201ENST00000603609 255 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 AC128687.1-201ENST00000605304 619 ntBASIC3.39□□□□□ -1.87
GABPAQ06546 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.39□□□□□ -1.87
GABPAQ06546 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GABPAQ06546 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.38□□□□□ -1.87
GABPAQ06546 SNORA7.2-201ENST00000364446 145 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
GABPAQ06546 RNU6-1181P-201ENST00000384191 106 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 Y_RNA.500-201ENST00000384466 111 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 MIR607-201ENST00000385241 96 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 HSPE1P26-201ENST00000405341 275 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC092447.6-201ENST00000414578 210 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.38□□□□□ -1.87
GABPAQ06546 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.38□□□□□ -1.87
GABPAQ06546 AC084290.1-201ENST00000434995 374 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.38□□□□□ -1.87
GABPAQ06546 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.38□□□□□ -1.87
GABPAQ06546 AC005297.2-201ENST00000450430 606 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.38□□□□□ -1.87
GABPAQ06546 RPL21P134-201ENST00000453468 483 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC026410.2-201ENST00000460281 156 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GABPAQ06546 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.38□□□□□ -1.87
GABPAQ06546 TMEM251P1-201ENST00000503717 318 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.38□□□□□ -1.87
GABPAQ06546 XKRY-201ENST00000510392 1100 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC079395.1-201ENST00000510981 262 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 RNY4P37-201ENST00000516225 96 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 RNU6-1073P-201ENST00000517182 106 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC109635.4-202ENST00000531666 412 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.38□□□□□ -1.87
GABPAQ06546 AC126177.3-201ENST00000551839 688 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC090695.1-201ENST00000561269 1222 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AL512347.1-201ENST00000566420 503 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AGGF1P5-201ENST00000567900 919 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 MIR3186-201ENST00000577404 85 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC138761.3-201ENST00000579993 334 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 OR4K7P-201ENST00000580232 945 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC245036.5-201ENST00000596330 847 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.38□□□□□ -1.87
GABPAQ06546 AC092628.2-201ENST00000622492 339 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC231657.1-201ENST00000624313 397 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.38□□□□□ -1.87
GABPAQ06546 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GABPAQ06546 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GABPAQ06546 GABRG2-229ENST00000641017 3628 ntBASIC3.38□□□□□ -1.87
GABPAQ06546 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
GABPAQ06546 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GABPAQ06546 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
GABPAQ06546 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
GABPAQ06546 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.37□□□□□ -1.87
GABPAQ06546 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
GABPAQ06546 Y_RNA.311-201ENST00000365068 96 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 RAD23BP2-201ENST00000416003 1207 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.37□□□□□ -1.87
GABPAQ06546 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.37□□□□□ -1.87
GABPAQ06546 TRGVB-201ENST00000453257 471 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 RPL18AP17-201ENST00000455326 198 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 NECAP1P2-201ENST00000455668 727 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AC010285.1-201ENST00000470580 392 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AP001025.2-201ENST00000490908 477 ntBASIC3.37□□□□□ -1.87
GABPAQ06546 AC093278.1-201ENST00000494700 600 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms