Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 SCARNA17.2-201ENST00000516334 143 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 AC004486.1-201ENST00000546846 233 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 AL356280.1-201ENST00000603614 379 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 HSPE1P14-201ENST00000605812 302 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 AC120053.1-201ENST00000607706 736 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 SCARNA17.4-201ENST00000614296 143 ntBASIC1.76□□□□□ -2.13
ABCA4P78363 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.76□□□□□ -2.13
ABCA4P78363 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
ABCA4P78363 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
ABCA4P78363 DHFRP5-201ENST00000406944 564 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 XKRYP6-201ENST00000440468 1116 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 XKRYP3-201ENST00000442113 1116 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA4P78363 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.75□□□□□ -2.13
ABCA4P78363 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA4P78363 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ABCA4P78363 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA4P78363 AC244517.12-201ENST00000623581 663 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
ABCA4P78363 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.75□□□□□ -2.13
ABCA4P78363 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.75□□□□□ -2.13
ABCA4P78363 PSMA2P3-201ENST00000429685 675 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
ABCA4P78363 RPL23AP76-201ENST00000441860 458 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 AC233279.1-201ENST00000455300 423 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 RPS29P12-201ENST00000460178 152 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 AC011352.3-201ENST00000505162 593 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 AC090071.1-201ENST00000507713 644 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.75□□□□□ -2.13
ABCA4P78363 SNORD59.2-201ENST00000516873 68 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.75□□□□□ -2.13
ABCA4P78363 AC107954.1-201ENST00000565906 727 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 AC009220.3-201ENST00000604318 586 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ABCA4P78363 AC090617.7-201ENST00000623952 126 ntBASIC1.75□□□□□ -2.13
ABCA4P78363 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
ABCA4P78363 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ABCA4P78363 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.75□□□□□ -2.13
ABCA4P78363 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.74□□□□□ -2.13
ABCA4P78363 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
ABCA4P78363 SNORD21-201ENST00000383953 95 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 RNU6-167P-201ENST00000384292 106 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 OR51AB1P-201ENST00000429046 620 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 HIGD1AP11-201ENST00000438361 280 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 RPL23AP58-201ENST00000440453 469 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 USP9YP8-201ENST00000441913 500 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 AC009237.8-201ENST00000445492 379 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.74□□□□□ -2.13
ABCA4P78363 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.74□□□□□ -2.13
ABCA4P78363 AC104308.1-201ENST00000454621 333 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 MTCYBP37-201ENST00000510642 1133 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 RNU1-61P-201ENST00000516107 151 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 SNORA31.15-201ENST00000516771 132 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 AP003467.2-201ENST00000520175 319 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 AL163153.1-201ENST00000554223 283 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.74□□□□□ -2.13
ABCA4P78363 LRRC37A5P-203ENST00000580181 585 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.74□□□□□ -2.13
ABCA4P78363 AC073387.2-201ENST00000604797 784 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 AC019159.1-201ENST00000605094 187 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 Z82195.2-201ENST00000612348 18351 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.74□□□□□ -2.13
ABCA4P78363 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ABCA4P78363 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ABCA4P78363 BTF3P4-201ENST00000418852 495 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.74□□□□□ -2.13
ABCA4P78363 RNU6-56P-201ENST00000516986 93 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 AC104115.2-201ENST00000523026 687 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.74□□□□□ -2.13
ABCA4P78363 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 SNORD84-203ENST00000584275 78 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 MIR6864-201ENST00000617935 70 ntBASIC1.74□□□□□ -2.13
ABCA4P78363 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA4P78363 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA4P78363 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.73□□□□□ -2.13
ABCA4P78363 ELOCP13-201ENST00000443934 329 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AL157827.1-201ENST00000447622 132 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AC089999.1-201ENST00000460336 374 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 RPS23P3-201ENST00000470993 430 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA4P78363 RN7SKP96-201ENST00000516948 297 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.73□□□□□ -2.13
ABCA4P78363 ISCA1P3-201ENST00000577104 373 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
ABCA4P78363 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA4P78363 AC055764.2-201ENST00000610089 670 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 FAM157B-203ENST00000639350 358 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 Y_RNA.122-201ENST00000363331 96 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 DYNLT3P1-201ENST00000378574 347 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.73□□□□□ -2.13
ABCA4P78363 AL096701.2-201ENST00000416920 238 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ABCA4P78363 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.73□□□□□ -2.13
ABCA4P78363 ELOCP11-201ENST00000436690 332 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 NDUFA5P4-201ENST00000436704 385 ntBASIC1.73□□□□□ -2.13
ABCA4P78363 ELOCP16-201ENST00000444494 332 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms