Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AL445687.1-201ENST00000439946 251 ntBASIC2.32□□□□□ -2.04
ACTBP60709 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.32□□□□□ -2.04
ACTBP60709 AL929288.2-201ENST00000446368 407 ntBASIC2.32□□□□□ -2.04
ACTBP60709 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ACTBP60709 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.32□□□□□ -2.04
ACTBP60709 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.32□□□□□ -2.04
ACTBP60709 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.32□□□□□ -2.04
ACTBP60709 AC087808.1-201ENST00000520501 361 ntBASIC2.32□□□□□ -2.04
ACTBP60709 AC022080.3-201ENST00000544433 482 ntBASIC2.32□□□□□ -2.04
ACTBP60709 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.32□□□□□ -2.04
ACTBP60709 AC104229.1-201ENST00000561364 255 ntBASIC2.32□□□□□ -2.04
ACTBP60709 AC010546.1-201ENST00000569391 485 ntBASIC2.32□□□□□ -2.04
ACTBP60709 AC090616.3-201ENST00000582184 217 ntBASIC2.32□□□□□ -2.04
ACTBP60709 OR1M4P-201ENST00000589199 287 ntBASIC2.32□□□□□ -2.04
ACTBP60709 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.32□□□□□ -2.04
ACTBP60709 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.32□□□□□ -2.04
ACTBP60709 AC006213.5-201ENST00000619673 288 ntBASIC2.32□□□□□ -2.04
ACTBP60709 AC040168.1-201ENST00000623594 991 ntBASIC2.32□□□□□ -2.04
ACTBP60709 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.32□□□□□ -2.04
ACTBP60709 AL022578.1-201ENST00000439330 1433 ntBASIC2.32□□□□□ -2.04
ACTBP60709 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
ACTBP60709 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.31□□□□□ -2.04
ACTBP60709 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ACTBP60709 SNORD56.4-201ENST00000363883 71 ntBASIC2.31□□□□□ -2.04
ACTBP60709 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ACTBP60709 MIR128-1-201ENST00000384921 82 ntBASIC2.31□□□□□ -2.04
ACTBP60709 MIR1290-201ENST00000408735 78 ntBASIC2.31□□□□□ -2.04
ACTBP60709 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.31□□□□□ -2.04
ACTBP60709 MTND4LP10-201ENST00000435146 291 ntBASIC2.31□□□□□ -2.04
ACTBP60709 RPL37P4-201ENST00000448908 268 ntBASIC2.31□□□□□ -2.04
ACTBP60709 PNPLA4P1-201ENST00000458328 305 ntBASIC2.31□□□□□ -2.04
ACTBP60709 RNU6-775P-201ENST00000459318 96 ntBASIC2.31□□□□□ -2.04
ACTBP60709 PABPC1P3-201ENST00000469174 459 ntBASIC2.31□□□□□ -2.04
ACTBP60709 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.31□□□□□ -2.04
ACTBP60709 COX6CP5-201ENST00000527162 228 ntBASIC2.31□□□□□ -2.04
ACTBP60709 EEF1B2P4-201ENST00000551398 348 ntBASIC2.31□□□□□ -2.04
ACTBP60709 MYL12BP1-201ENST00000569826 507 ntBASIC2.31□□□□□ -2.04
ACTBP60709 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
ACTBP60709 VN1R78P-201ENST00000597393 564 ntBASIC2.31□□□□□ -2.04
ACTBP60709 AL020997.3-201ENST00000602843 359 ntBASIC2.31□□□□□ -2.04
ACTBP60709 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.31□□□□□ -2.04
ACTBP60709 KATNBL1P1-201ENST00000605192 748 ntBASIC2.31□□□□□ -2.04
ACTBP60709 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.31□□□□□ -2.04
ACTBP60709 MFSD8-245ENST00000641743 948 ntBASIC2.31□□□□□ -2.04
ACTBP60709 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
ACTBP60709 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ACTBP60709 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ACTBP60709 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ACTBP60709 AL137003.2-201ENST00000606924 2538 ntBASIC2.31□□□□□ -2.04
ACTBP60709 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ACTBP60709 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ACTBP60709 RNU6-461P-201ENST00000364195 107 ntBASIC2.3□□□□□ -2.04
ACTBP60709 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ACTBP60709 SNORA48.5-201ENST00000391143 135 ntBASIC2.3□□□□□ -2.04
ACTBP60709 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.3□□□□□ -2.04
ACTBP60709 NDUFB4P4-201ENST00000404822 243 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AL513475.1-201ENST00000406602 315 ntBASIC2.3□□□□□ -2.04
ACTBP60709 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.3□□□□□ -2.04
ACTBP60709 OR51A3P-201ENST00000413596 924 ntBASIC2.3□□□□□ -2.04
ACTBP60709 RPL7P44-201ENST00000424827 742 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AL365496.1-201ENST00000426885 215 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AL035410.1-201ENST00000427409 427 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.3□□□□□ -2.04
ACTBP60709 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.3□□□□□ -2.04
ACTBP60709 RSL24D1P3-201ENST00000449255 495 ntBASIC2.3□□□□□ -2.04
ACTBP60709 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ACTBP60709 MTND4LP3-201ENST00000468320 276 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.3□□□□□ -2.04
ACTBP60709 AC091826.1-201ENST00000514065 313 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.3□□□□□ -2.04
ACTBP60709 AC124293.1-201ENST00000530034 493 ntBASIC2.3□□□□□ -2.04
ACTBP60709 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.3□□□□□ -2.04
ACTBP60709 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ACTBP60709 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.3□□□□□ -2.04
ACTBP60709 AC005498.1-201ENST00000592125 465 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.3□□□□□ -2.04
ACTBP60709 AC011890.2-201ENST00000613393 294 ntBASIC2.3□□□□□ -2.04
ACTBP60709 AL449363.1-201ENST00000617815 186 ntBASIC2.3□□□□□ -2.04
ACTBP60709 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ACTBP60709 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.3□□□□□ -2.04
ACTBP60709 AL512283.1-201ENST00000606756 1384 ntBASIC2.3□□□□□ -2.04
ACTBP60709 ZNF833P-201ENST00000424938 1494 ntBASIC2.3□□□□□ -2.04
ACTBP60709 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.3□□□□□ -2.04
ACTBP60709 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ACTBP60709 RNU6-619P-201ENST00000365146 108 ntBASIC2.29□□□□□ -2.04
ACTBP60709 RNU6-1197P-201ENST00000391183 107 ntBASIC2.29□□□□□ -2.04
ACTBP60709 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.29□□□□□ -2.04
ACTBP60709 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.29□□□□□ -2.04
ACTBP60709 EEF1A1P41-201ENST00000414667 207 ntBASIC2.29□□□□□ -2.04
ACTBP60709 VN1R42P-201ENST00000424651 344 ntBASIC2.29□□□□□ -2.04
ACTBP60709 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.29□□□□□ -2.04
ACTBP60709 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.29□□□□□ -2.04
ACTBP60709 AC009296.1-201ENST00000443146 155 ntBASIC2.29□□□□□ -2.04
ACTBP60709 NANOGNBP1-201ENST00000448444 480 ntBASIC2.29□□□□□ -2.04
ACTBP60709 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.29□□□□□ -2.04
ACTBP60709 AC233279.1-201ENST00000455300 423 ntBASIC2.29□□□□□ -2.04
ACTBP60709 AL109741.2-201ENST00000455561 343 ntBASIC2.29□□□□□ -2.04
ACTBP60709 TRBV26-201ENST00000456572 344 ntBASIC2.29□□□□□ -2.04
ACTBP60709 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.29□□□□□ -2.04
ACTBP60709 RPL30P5-201ENST00000494923 336 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms