Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FTH1P6-201ENST00000430768 320 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.02□□□□□ -1.77
SUMO3P55854 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 HMGB3P12-201ENST00000438745 556 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 DDX3P2-201ENST00000446138 111 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.02□□□□□ -1.77
SUMO3P55854 MTCO3P38-201ENST00000468910 766 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 GMPSP1-201ENST00000514075 579 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 SNORD27.1-201ENST00000516319 72 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 AC109635.3-201ENST00000529536 185 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 AL109766.1-201ENST00000555080 552 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.02□□□□□ -1.77
SUMO3P55854 MED28P6-201ENST00000558776 231 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC092325.1-201ENST00000566449 554 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 AP001330.4-201ENST00000604350 154 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 Z98200.1-201ENST00000607298 470 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AP001596.2-201ENST00000608410 312 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 MIR6820-201ENST00000611508 62 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AC010133.1-201ENST00000615809 842 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 AP000346.3-201ENST00000622821 210 ntBASIC4.02□□□□□ -1.77
SUMO3P55854 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SUMO3P55854 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.02□□□□□ -1.77
SUMO3P55854 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SUMO3P55854 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 AL137003.2-201ENST00000606924 2538 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SUMO3P55854 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.01□□□□□ -1.77
SUMO3P55854 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.01□□□□□ -1.77
SUMO3P55854 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.01□□□□□ -1.77
SUMO3P55854 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.01□□□□□ -1.77
SUMO3P55854 Y_RNA.453-201ENST00000384223 109 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 Y_RNA.573-201ENST00000384763 105 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SUMO3P55854 MRPL50P2-201ENST00000416821 482 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.01□□□□□ -1.77
SUMO3P55854 AC008850.1-201ENST00000427546 362 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.01□□□□□ -1.77
SUMO3P55854 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.01□□□□□ -1.77
SUMO3P55854 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.01□□□□□ -1.77
SUMO3P55854 DHFRP3-201ENST00000455595 559 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AL356010.1-201ENST00000456364 102 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 RPL21P126-201ENST00000470049 478 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 RPL36AP51-201ENST00000487216 318 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 RN7SL810P-201ENST00000493031 276 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC106872.2-201ENST00000494303 480 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC026427.2-201ENST00000506228 536 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC117522.1-201ENST00000509821 380 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.01□□□□□ -1.77
SUMO3P55854 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.01□□□□□ -1.77
SUMO3P55854 RPS3AP4-201ENST00000555161 764 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 NCAPGP2-201ENST00000557911 754 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 RPL23AP84-201ENST00000571193 464 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.01□□□□□ -1.77
SUMO3P55854 MIR4330-201ENST00000579077 105 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.01□□□□□ -1.77
SUMO3P55854 MIR5096-201ENST00000583713 70 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 MIR4715-201ENST00000584117 79 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 RN7SL52P-201ENST00000584271 284 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.01□□□□□ -1.77
SUMO3P55854 AC007621.1-201ENST00000604544 437 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AL121992.2-201ENST00000606262 256 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 AC008536.2-201ENST00000607284 349 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.01□□□□□ -1.77
SUMO3P55854 RN7SL722P-201ENST00000617780 284 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 uc_338.13-201ENST00000618243 179 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 RN7SL565P-201ENST00000618246 284 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.01□□□□□ -1.77
SUMO3P55854 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.01□□□□□ -1.77
SUMO3P55854 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SUMO3P55854 AC015813.6-201ENST00000624409 5808 ntBASIC4.01□□□□□ -1.77
SUMO3P55854 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.01□□□□□ -1.77
SUMO3P55854 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SUMO3P55854 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4□□□□□ -1.77
SUMO3P55854 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SUMO3P55854 BDP1P-201ENST00000582658 1990 ntBASIC4□□□□□ -1.77
SUMO3P55854 MTND5P17-201ENST00000418405 1603 ntBASIC4□□□□□ -1.77
SUMO3P55854 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4□□□□□ -1.77
SUMO3P55854 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4□□□□□ -1.77
SUMO3P55854 RNU5A-1-201ENST00000362698 116 ntBASIC4□□□□□ -1.77
SUMO3P55854 Y_RNA.256-201ENST00000364594 104 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms