Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU1-32P-201ENST00000363937 159 ntBASIC3.65□□□□□ -1.83
CDH12P55289 RNU6-282P-201ENST00000365357 103 ntBASIC3.65□□□□□ -1.83
CDH12P55289 MIR19A-201ENST00000384878 82 ntBASIC3.65□□□□□ -1.83
CDH12P55289 MIR181A1-201ENST00000385026 110 ntBASIC3.65□□□□□ -1.83
CDH12P55289 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH12P55289 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.65□□□□□ -1.83
CDH12P55289 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 MTND1P23-201ENST00000416931 372 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC007283.2-201ENST00000424739 197 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC233728.2-201ENST00000425348 757 ntBASIC3.65□□□□□ -1.83
CDH12P55289 ISCA1P1-201ENST00000426679 387 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH12P55289 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH12P55289 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 RAC1P7-201ENST00000445367 377 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 NPM1P49-201ENST00000448027 714 ntBASIC3.65□□□□□ -1.83
CDH12P55289 RPS17P13-201ENST00000448974 407 ntBASIC3.65□□□□□ -1.83
CDH12P55289 PSPHP1-201ENST00000450062 261 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 RN7SL93P-201ENST00000463035 293 ntBASIC3.65□□□□□ -1.83
CDH12P55289 ST13P14-201ENST00000474095 734 ntBASIC3.65□□□□□ -1.83
CDH12P55289 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH12P55289 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 HMGB1P29-201ENST00000505659 499 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH12P55289 RNU6-718P-201ENST00000516166 105 ntBASIC3.65□□□□□ -1.83
CDH12P55289 RNU6-528P-201ENST00000516926 100 ntBASIC3.65□□□□□ -1.83
CDH12P55289 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 AP003730.1-201ENST00000524605 285 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH12P55289 FAM92A1P1-201ENST00000528023 890 ntBASIC3.65□□□□□ -1.83
CDH12P55289 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH12P55289 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 AC099489.2-201ENST00000574976 260 ntBASIC3.65□□□□□ -1.83
CDH12P55289 RN7SL600P-201ENST00000581811 299 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH12P55289 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH12P55289 AC112230.1-201ENST00000604342 547 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AP000860.1-201ENST00000605250 559 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AL590282.1-201ENST00000610379 1136 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AC024941.1-201ENST00000612250 334 ntBASIC3.65□□□□□ -1.83
CDH12P55289 AL356585.4-201ENST00000623078 1229 ntBASIC3.65□□□□□ -1.83
CDH12P55289 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CDH12P55289 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH12P55289 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH12P55289 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH12P55289 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CDH12P55289 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 AC093536.2-201ENST00000565257 1406 ntBASIC3.64□□□□□ -1.83
CDH12P55289 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH12P55289 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDH12P55289 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 CALM2P3-201ENST00000400429 449 ntBASIC3.64□□□□□ -1.83
CDH12P55289 MIR937-201ENST00000401271 86 ntBASIC3.64□□□□□ -1.83
CDH12P55289 RNU2-8P-201ENST00000410727 190 ntBASIC3.64□□□□□ -1.83
CDH12P55289 RNU4-55P-201ENST00000410731 137 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 AC108032.1-201ENST00000416706 207 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC069157.1-201ENST00000421749 137 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 RPL18P10-201ENST00000425606 538 ntBASIC3.64□□□□□ -1.83
CDH12P55289 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH12P55289 MTCO2P11-201ENST00000431069 680 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 TPT1P14-201ENST00000448018 505 ntBASIC3.64□□□□□ -1.83
CDH12P55289 Z99127.3-201ENST00000448158 395 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH12P55289 PPIAP3-201ENST00000450588 505 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH12P55289 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH12P55289 Vault.3-201ENST00000516676 95 ntBASIC3.64□□□□□ -1.83
CDH12P55289 CYCSP29-201ENST00000533731 318 ntBASIC3.64□□□□□ -1.83
CDH12P55289 CR383656.7-201ENST00000548164 174 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC007424.1-203ENST00000554613 687 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH12P55289 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 MIR3167-201ENST00000579623 85 ntBASIC3.64□□□□□ -1.83
CDH12P55289 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH12P55289 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH12P55289 AC011451.2-201ENST00000604303 598 ntBASIC3.64□□□□□ -1.83
CDH12P55289 BRDTP1-201ENST00000605735 677 ntBASIC3.64□□□□□ -1.83
CDH12P55289 HMGN2P28-201ENST00000606102 262 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms