Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 OR1AA1P-201ENST00000419597 916 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AL137014.1-201ENST00000420490 1226 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 TRIAP1P1-201ENST00000427062 225 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMK1P53667 MTCYBP45-201ENST00000435243 565 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 EEF1E1P1-201ENST00000446998 430 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AC002381.1-201ENST00000447049 280 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMK1P53667 USP9YP10-201ENST00000454868 628 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMK1P53667 RPL31P50-201ENST00000471002 296 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LIMK1P53667 RNU6-1095P-201ENST00000516148 108 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.58□□□□□ -1.84
LIMK1P53667 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMK1P53667 SETP7-201ENST00000552169 453 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
LIMK1P53667 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 AL133393.1-201ENST00000603277 287 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AL596327.1-201ENST00000603629 213 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AP001330.4-201ENST00000604350 154 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.58□□□□□ -1.84
LIMK1P53667 AL357080.1-201ENST00000617394 239 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AL356585.4-201ENST00000623078 1229 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.58□□□□□ -1.84
LIMK1P53667 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LIMK1P53667 AC007823.1-201ENST00000569932 1566 ntBASIC3.58□□□□□ -1.84
LIMK1P53667 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
LIMK1P53667 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.58□□□□□ -1.84
LIMK1P53667 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMK1P53667 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMK1P53667 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
LIMK1P53667 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 OR5H2-201ENST00000355273 945 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMK1P53667 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 CYCSP45-201ENST00000402289 315 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 HSPE1P1-201ENST00000421494 318 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 COTL1P1-201ENST00000422309 375 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 MTND5P14-201ENST00000441481 1267 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AC006480.1-201ENST00000449887 378 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AC140076.1-201ENST00000449897 361 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 Z82190.1-201ENST00000454534 490 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 RPL27AP5-201ENST00000469428 449 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.57□□□□□ -1.84
LIMK1P53667 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 AC147055.4-201ENST00000504399 745 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
LIMK1P53667 PHBP14-201ENST00000512887 367 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 AC093331.1-201ENST00000521474 169 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.57□□□□□ -1.84
LIMK1P53667 UBE2NP1-201ENST00000545592 458 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LIMK1P53667 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.57□□□□□ -1.84
LIMK1P53667 AC099489.2-201ENST00000574976 260 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.57□□□□□ -1.84
LIMK1P53667 AC004853.1-201ENST00000604902 698 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 RMST_8.1-201ENST00000610287 165 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AL355493.4-201ENST00000618530 292 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 AC233263.6-201ENST00000631132 1963 ntBASIC3.57□□□□□ -1.84
LIMK1P53667 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.57□□□□□ -1.84
LIMK1P53667 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LIMK1P53667 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.57□□□□□ -1.84
LIMK1P53667 AC090740.1-201ENST00000623193 2262 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
LIMK1P53667 AL356274.2-201ENST00000624379 3752 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
LIMK1P53667 AC104454.1-201ENST00000421341 1401 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.56□□□□□ -1.84
LIMK1P53667 DDX43P2-201ENST00000604753 1354 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.56□□□□□ -1.84
LIMK1P53667 SNORD113-6-201ENST00000363345 75 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 RNU6-931P-201ENST00000363850 107 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 RNU6-301P-201ENST00000384277 107 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 RNA5SP424-201ENST00000390988 115 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 SOD2P1-201ENST00000396543 562 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AC245054.1-201ENST00000420944 258 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AL022400.1-201ENST00000423946 935 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 MTATP6P4-201ENST00000427725 675 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 DPPA2P1-201ENST00000428060 556 ntBASIC3.56□□□□□ -1.84
LIMK1P53667 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms