Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 RN7SL600P-201ENST00000581811 299 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.23□□□□□ -1.73
NEK3P51956 AC020914.4-201ENST00000597690 277 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AL020997.2-201ENST00000602607 184 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AL358072.1-201ENST00000604156 575 ntBASIC4.23□□□□□ -1.73
NEK3P51956 SNHG22-203ENST00000617833 660 ntBASIC4.23□□□□□ -1.73
NEK3P51956 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEK3P51956 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NEK3P51956 AC008568.2-201ENST00000623862 2313 ntBASIC4.23□□□□□ -1.73
NEK3P51956 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NEK3P51956 TEX21P-201ENST00000447107 1476 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AF127577.6-201ENST00000623352 2191 ntBASIC4.23□□□□□ -1.73
NEK3P51956 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.23□□□□□ -1.73
NEK3P51956 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NEK3P51956 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.22□□□□□ -1.73
NEK3P51956 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.22□□□□□ -1.73
NEK3P51956 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NEK3P51956 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
NEK3P51956 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 RNU6-1284P-201ENST00000363701 100 ntBASIC4.22□□□□□ -1.73
NEK3P51956 RNA5SP515-201ENST00000364570 118 ntBASIC4.22□□□□□ -1.73
NEK3P51956 SNORA57.1-201ENST00000391227 145 ntBASIC4.22□□□□□ -1.73
NEK3P51956 RPL21P24-201ENST00000413752 448 ntBASIC4.22□□□□□ -1.73
NEK3P51956 RAC1P3-201ENST00000416129 580 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.22□□□□□ -1.73
NEK3P51956 RPL7L1P10-201ENST00000427790 463 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.22□□□□□ -1.73
NEK3P51956 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 RPS27AP1-201ENST00000475545 471 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AF213884.1-201ENST00000488102 463 ntBASIC4.22□□□□□ -1.73
NEK3P51956 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 RN7SKP13-201ENST00000515933 244 ntBASIC4.22□□□□□ -1.73
NEK3P51956 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.22□□□□□ -1.73
NEK3P51956 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 SYF2P1-201ENST00000550658 413 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 HSPE1P5-201ENST00000561489 272 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 MTCYBP33-201ENST00000575007 1130 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 MIR3118-1-201ENST00000581787 76 ntBASIC4.22□□□□□ -1.73
NEK3P51956 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.22□□□□□ -1.73
NEK3P51956 NRBF2P1-201ENST00000587407 859 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AF038458.1-201ENST00000588406 262 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.22□□□□□ -1.73
NEK3P51956 VN1R85P-201ENST00000601587 426 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.22□□□□□ -1.73
NEK3P51956 AC091953.2-201ENST00000623979 160 ntBASIC4.22□□□□□ -1.73
NEK3P51956 AC112484.5-201ENST00000624189 228 ntBASIC4.22□□□□□ -1.73
NEK3P51956 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
NEK3P51956 FARSBP1-201ENST00000435808 1778 ntBASIC4.22□□□□□ -1.73
NEK3P51956 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.21□□□□□ -1.73
NEK3P51956 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NEK3P51956 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NEK3P51956 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NEK3P51956 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 PPIAP31-201ENST00000405422 495 ntBASIC4.21□□□□□ -1.74
NEK3P51956 RN7SKP159-201ENST00000410657 292 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.21□□□□□ -1.74
NEK3P51956 AL356095.1-201ENST00000417217 199 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC018630.2-202ENST00000422992 927 ntBASIC4.21□□□□□ -1.74
NEK3P51956 NDUFB4P7-201ENST00000423198 363 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC019097.1-201ENST00000424783 735 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.21□□□□□ -1.74
NEK3P51956 AL590383.1-201ENST00000428602 75 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC010153.1-201ENST00000432862 727 ntBASIC4.21□□□□□ -1.74
NEK3P51956 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.21□□□□□ -1.74
NEK3P51956 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.21□□□□□ -1.74
NEK3P51956 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NEK3P51956 AC016696.1-201ENST00000446949 318 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.21□□□□□ -1.74
NEK3P51956 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.21□□□□□ -1.74
NEK3P51956 RN7SL604P-201ENST00000492589 296 ntBASIC4.21□□□□□ -1.74
NEK3P51956 AC020893.1-201ENST00000502452 580 ntBASIC4.21□□□□□ -1.74
NEK3P51956 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms