Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC096947.1-201ENST00000603233 470 ntBASIC2.76□□□□□ -1.97
RFX3P48380 AC015871.2-201ENST00000603605 948 ntBASIC2.76□□□□□ -1.97
RFX3P48380 NUTF2P8-201ENST00000604593 363 ntBASIC2.76□□□□□ -1.97
RFX3P48380 AP003122.6-201ENST00000623831 495 ntBASIC2.76□□□□□ -1.97
RFX3P48380 AC009039.2-201ENST00000624524 529 ntBASIC2.76□□□□□ -1.97
RFX3P48380 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX3P48380 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFX3P48380 Z99496.1-201ENST00000469424 1477 ntBASIC2.76□□□□□ -1.97
RFX3P48380 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
RFX3P48380 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX3P48380 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFX3P48380 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
RFX3P48380 TAB3P1-202ENST00000452645 1634 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC009812.4-201ENST00000569134 1805 ntBASIC2.75□□□□□ -1.97
RFX3P48380 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFX3P48380 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFX3P48380 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RFX3P48380 RNU6-799P-201ENST00000363567 107 ntBASIC2.75□□□□□ -1.97
RFX3P48380 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RFX3P48380 SNORA54-201ENST00000384281 123 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AL138885.1-201ENST00000405921 675 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX3P48380 MTND4P3-201ENST00000417829 541 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AL137014.1-201ENST00000420490 1226 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX3P48380 EZH2P1-201ENST00000431167 291 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC093155.1-201ENST00000440164 826 ntBASIC2.75□□□□□ -1.97
RFX3P48380 RPL23AP58-201ENST00000440453 469 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX3P48380 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.75□□□□□ -1.97
RFX3P48380 AC112492.1-201ENST00000449607 712 ntBASIC2.75□□□□□ -1.97
RFX3P48380 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX3P48380 RPL27AP5-201ENST00000469428 449 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC117440.1-201ENST00000474107 571 ntBASIC2.75□□□□□ -1.97
RFX3P48380 OR4G11P-201ENST00000492842 939 ntBASIC2.75□□□□□ -1.97
RFX3P48380 COX7A2P2-201ENST00000505291 250 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC069306.1-201ENST00000507006 843 ntBASIC2.75□□□□□ -1.97
RFX3P48380 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
RFX3P48380 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX3P48380 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.75□□□□□ -1.97
RFX3P48380 AC007536.1-201ENST00000533382 349 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX3P48380 CR383656.7-201ENST00000548164 174 ntBASIC2.75□□□□□ -1.97
RFX3P48380 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.75□□□□□ -1.97
RFX3P48380 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.75□□□□□ -1.97
RFX3P48380 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.75□□□□□ -1.97
RFX3P48380 AC006539.2-201ENST00000601729 572 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AL138880.2-201ENST00000616214 239 ntBASIC2.75□□□□□ -1.97
RFX3P48380 AC253576.2-201ENST00000618815 580 ntBASIC2.75□□□□□ -1.97
RFX3P48380 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RFX3P48380 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
RFX3P48380 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RFX3P48380 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RFX3P48380 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX3P48380 TMEM167AP1-201ENST00000423409 219 ntBASIC2.74□□□□□ -1.97
RFX3P48380 SEPT7P5-201ENST00000434048 306 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 RPL21P41-201ENST00000459863 264 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AP001992.1-205ENST00000462248 379 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX3P48380 AC010460.2-201ENST00000509054 677 ntBASIC2.74□□□□□ -1.97
RFX3P48380 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX3P48380 RNU6-1261P-201ENST00000517194 104 ntBASIC2.74□□□□□ -1.97
RFX3P48380 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.74□□□□□ -1.97
RFX3P48380 OR10V3P-201ENST00000525712 725 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 AP002404.1-201ENST00000532005 451 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.74□□□□□ -1.97
RFX3P48380 AC024224.1-201ENST00000538284 609 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX3P48380 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 AC022080.3-201ENST00000544433 482 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 OR4K8P-201ENST00000578842 1048 ntBASIC2.74□□□□□ -1.97
RFX3P48380 MIR5708-201ENST00000579723 85 ntBASIC2.74□□□□□ -1.97
RFX3P48380 MIR4325-201ENST00000583049 90 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC245036.5-201ENST00000596330 847 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AL390838.2-201ENST00000602394 274 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AL445435.1-201ENST00000604232 665 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC010975.3-201ENST00000618727 978 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX3P48380 AC010872.1-201ENST00000624225 675 ntBASIC2.74□□□□□ -1.97
RFX3P48380 MKKS-204ENST00000639674 192 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AL035425.3-201ENST00000564206 4996 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AC000403.1-201ENST00000613696 3585 ntBASIC2.74□□□□□ -1.97
RFX3P48380 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RFX3P48380 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
RFX3P48380 OR4G11P-202ENST00000642116 1414 ntBASIC2.74□□□□□ -1.97
RFX3P48380 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
RFX3P48380 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.74□□□□□ -1.97
RFX3P48380 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.73□□□□□ -1.97
RFX3P48380 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
RFX3P48380 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.73□□□□□ -1.97
RFX3P48380 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.73□□□□□ -1.97
RFX3P48380 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RFX3P48380 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
RFX3P48380 MIR181B1-201ENST00000385240 110 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms