Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 AC044913.1-201ENST00000557200 430 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 AC107954.1-201ENST00000565906 727 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 MIR3690-201ENST00000580266 75 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AC126365.2-201ENST00000580630 379 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
CXCL12P48061 MIR4635-201ENST00000583759 79 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 AP001542.2-201ENST00000593141 364 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CXCL12P48061 AL020991.1-201ENST00000612314 373 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL12P48061 AC126544.2-201ENST00000625174 749 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CXCL12P48061 AL353746.1-201ENST00000566293 6881 ntBASIC2.6□□□□□ -1.99
CXCL12P48061 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.6□□□□□ -1.99
CXCL12P48061 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CXCL12P48061 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 RNU6-839P-201ENST00000363347 108 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 RNU6-115P-201ENST00000364310 107 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CXCL12P48061 Y_RNA.493-201ENST00000384422 102 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 MT-TC-201ENST00000387405 66 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CXCL12P48061 RNU1-101P-201ENST00000391171 127 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 RPL7P27-201ENST00000403775 720 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 MIR1250-201ENST00000408098 113 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AC096533.1-201ENST00000411645 353 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AL136133.1-201ENST00000413694 376 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 BTF3P8-201ENST00000414577 526 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 HMGB3P23-201ENST00000414981 585 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CXCL12P48061 TOMM22P1-201ENST00000418578 312 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL12P48061 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.59□□□□□ -1.99
CXCL12P48061 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.59□□□□□ -1.99
CXCL12P48061 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.59□□□□□ -1.99
CXCL12P48061 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.59□□□□□ -1.99
CXCL12P48061 FAM103A2P-201ENST00000444122 354 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 COX6CP18-201ENST00000448769 222 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 SSXP4-201ENST00000451349 245 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 GAPDHP39-201ENST00000481866 979 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL12P48061 RN7SL636P-201ENST00000497504 294 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.59□□□□□ -1.99
CXCL12P48061 AC112206.4-201ENST00000515142 405 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 RNA5SP385-201ENST00000515947 110 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 SNORA31.26-201ENST00000517250 137 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AC104417.1-201ENST00000523974 751 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AC243972.3-201ENST00000539655 198 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.59□□□□□ -1.99
CXCL12P48061 DEFB122-202ENST00000569013 197 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 MIR4666A-201ENST00000580160 79 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.59□□□□□ -1.99
CXCL12P48061 AC090616.5-202ENST00000582111 297 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 AC113368.1-201ENST00000603736 382 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 U73479.1-201ENST00000618062 168 ntBASIC2.59□□□□□ -1.99
CXCL12P48061 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL12P48061 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL12P48061 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.59□□□□□ -1.99
CXCL12P48061 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL12P48061 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.59□□□□□ -1.99
CXCL12P48061 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CXCL12P48061 API5P2-201ENST00000397055 1498 ntBASIC2.58□□□□□ -2
CXCL12P48061 ZNF734P-201ENST00000419494 1534 ntBASIC2.58□□□□□ -2
CXCL12P48061 AC004925.1-201ENST00000624256 2706 ntBASIC2.58□□□□□ -2
CXCL12P48061 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.58□□□□□ -2
CXCL12P48061 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CXCL12P48061 RPL9P7-201ENST00000330965 580 ntBASIC2.58□□□□□ -2
CXCL12P48061 SNORD114-30-201ENST00000364448 72 ntBASIC2.58□□□□□ -2
CXCL12P48061 MIR217-201ENST00000384817 110 ntBASIC2.58□□□□□ -2
CXCL12P48061 EIF5P1-201ENST00000400019 1231 ntBASIC2.58□□□□□ -2
CXCL12P48061 AL121978.1-201ENST00000402778 359 ntBASIC2.58□□□□□ -2
CXCL12P48061 RN7SKP223-201ENST00000410582 62 ntBASIC2.58□□□□□ -2
CXCL12P48061 RNU4-78P-201ENST00000410940 126 ntBASIC2.58□□□□□ -2
CXCL12P48061 DPH3P2-201ENST00000422618 250 ntBASIC2.58□□□□□ -2
CXCL12P48061 AL035410.1-201ENST00000427409 427 ntBASIC2.58□□□□□ -2
CXCL12P48061 AC005345.1-201ENST00000431868 217 ntBASIC2.58□□□□□ -2
CXCL12P48061 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.58□□□□□ -2
CXCL12P48061 TRIM60P18-201ENST00000441518 828 ntBASIC2.58□□□□□ -2
CXCL12P48061 AC125238.1-201ENST00000448842 249 ntBASIC2.58□□□□□ -2
CXCL12P48061 MRPL42P4-201ENST00000453267 443 ntBASIC2.58□□□□□ -2
CXCL12P48061 RPL23AP31-201ENST00000456160 467 ntBASIC2.58□□□□□ -2
CXCL12P48061 SRIP1-201ENST00000489235 288 ntBASIC2.58□□□□□ -2
CXCL12P48061 AC092436.1-201ENST00000506450 503 ntBASIC2.58□□□□□ -2
CXCL12P48061 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.58□□□□□ -2
CXCL12P48061 SNORA9.3-201ENST00000516383 129 ntBASIC2.58□□□□□ -2
CXCL12P48061 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.58□□□□□ -2
CXCL12P48061 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.58□□□□□ -2
CXCL12P48061 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.58□□□□□ -2
CXCL12P48061 AC087897.1-201ENST00000550134 156 ntBASIC2.58□□□□□ -2
CXCL12P48061 AC015712.3-201ENST00000559380 164 ntBASIC2.58□□□□□ -2
CXCL12P48061 MIR4506-201ENST00000584693 77 ntBASIC2.58□□□□□ -2
CXCL12P48061 AC078899.3-201ENST00000599065 212 ntBASIC2.58□□□□□ -2
CXCL12P48061 SNRPGP15-201ENST00000600149 222 ntBASIC2.58□□□□□ -2
CXCL12P48061 GAS5-AS1-201ENST00000602767 694 ntBASIC2.58□□□□□ -2
CXCL12P48061 AP002802.2-201ENST00000605877 235 ntBASIC2.58□□□□□ -2
CXCL12P48061 AL583856.2-201ENST00000606298 543 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms