Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD13P35453 AL606662.1-201ENST00000445763 553 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD13P35453 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD13P35453 AC008155.2-201ENST00000464337 397 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AC006499.5-201ENST00000505037 514 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.75□□□□□ -1.81
HOXD13P35453 SNORA70.19-201ENST00000516717 90 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 IGKV2-23-201ENST00000518729 323 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 ERHP1-201ENST00000523006 310 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD13P35453 AC087276.1-201ENST00000529659 480 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.75□□□□□ -1.81
HOXD13P35453 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD13P35453 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD13P35453 MIR4444-1-201ENST00000581696 74 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 MIR4444-2-201ENST00000584390 74 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD13P35453 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.75□□□□□ -1.81
HOXD13P35453 AC106791.2-201ENST00000604680 391 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AC097468.3-201ENST00000607956 456 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD13P35453 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD13P35453 AC008443.7-201ENST00000622195 246 ntBASIC3.75□□□□□ -1.81
HOXD13P35453 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD13P35453 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXD13P35453 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 AL049781.1-201ENST00000623195 3585 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXD13P35453 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXD13P35453 RNU6-328P-201ENST00000390887 106 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 MTND1P20-201ENST00000430341 950 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 RPL35AP22-201ENST00000436855 335 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 HMGN2P20-201ENST00000437531 273 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 RPL7P15-201ENST00000461190 712 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC091564.1-201ENST00000464563 479 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 RN7SL330P-201ENST00000469709 307 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AL049830.2-201ENST00000480072 201 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 RPL21P13-201ENST00000488305 481 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXD13P35453 AC110768.1-201ENST00000509222 400 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD13P35453 Y_RNA.717-201ENST00000517106 92 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 FAM60DP-201ENST00000524174 632 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD13P35453 AP004247.1-201ENST00000531556 1289 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 LRRC34P1-201ENST00000542742 915 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD13P35453 ZNF321P-202ENST00000550843 495 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.74□□□□□ -1.81
HOXD13P35453 TGIF1P1-201ENST00000558095 802 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXD13P35453 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD13P35453 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD13P35453 MIR4425-201ENST00000580572 84 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD13P35453 AL357094.1-201ENST00000603845 844 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC112187.2-201ENST00000604345 283 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC245389.1-201ENST00000605141 529 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC009902.3-201ENST00000606235 2172 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 MIR7851-201ENST00000610611 160 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.74□□□□□ -1.81
HOXD13P35453 AL355493.4-201ENST00000618530 292 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC131159.1-201ENST00000621854 213 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AC079416.3-201ENST00000624479 549 ntBASIC3.74□□□□□ -1.81
HOXD13P35453 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXD13P35453 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD13P35453 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXD13P35453 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 CUL1P1-201ENST00000509510 2425 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AP001486.2-201ENST00000561652 5113 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AC011460.1-201ENST00000636268 1834 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD13P35453 RPL7P26-201ENST00000333817 754 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 RNU5A-1-201ENST00000362698 116 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 RNU6-433P-201ENST00000363216 104 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD13P35453 RNU6-76P-201ENST00000384060 104 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 RNU6-114P-201ENST00000384704 105 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 PTMAP5-201ENST00000393073 333 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HOXD13P35453 RNU6-516P-201ENST00000411381 104 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 RAP1BP1-201ENST00000412709 553 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 RPS29P4-201ENST00000414733 161 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 RPL23AP39-201ENST00000415533 405 ntBASIC3.73□□□□□ -1.81
HOXD13P35453 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.73□□□□□ -1.81
HOXD13P35453 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.73□□□□□ -1.81
HOXD13P35453 AL356867.1-201ENST00000429623 299 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms