Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.01□□□□□ -1.77
EPHA3P29320 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHA3P29320 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHA3P29320 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.01□□□□□ -1.77
EPHA3P29320 AC109635.3-201ENST00000529536 185 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHA3P29320 PDCD5P1-201ENST00000543528 309 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHA3P29320 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.01□□□□□ -1.77
EPHA3P29320 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHA3P29320 AC025678.1-201ENST00000567861 338 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHA3P29320 MIR548S-201ENST00000581352 82 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.01□□□□□ -1.77
EPHA3P29320 AC025449.1-201ENST00000603896 529 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.01□□□□□ -1.77
EPHA3P29320 TUG1_1.1-201ENST00000610654 145 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 AC009161.2-201ENST00000624626 138 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 FAM91A3P-201ENST00000456826 2544 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
EPHA3P29320 Z73965.1-201ENST00000623412 2297 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 AC138915.3-201ENST00000562908 1389 ntBASIC4.01□□□□□ -1.77
EPHA3P29320 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
EPHA3P29320 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
EPHA3P29320 MTND5P3-201ENST00000438536 1800 ntBASIC4□□□□□ -1.77
EPHA3P29320 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
EPHA3P29320 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 AC025031.4-201ENST00000621248 3271 ntBASIC4□□□□□ -1.77
EPHA3P29320 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4□□□□□ -1.77
EPHA3P29320 RNU1-14P-201ENST00000362759 152 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNU6-637P-201ENST00000384050 107 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNU6-432P-201ENST00000384196 109 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNU6-39P-201ENST00000384344 107 ntBASIC4□□□□□ -1.77
EPHA3P29320 MIR124-3-201ENST00000384866 87 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNU6-837P-201ENST00000391056 108 ntBASIC4□□□□□ -1.77
EPHA3P29320 RPS4XP9-201ENST00000405151 780 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNU2-9P-201ENST00000410194 145 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNU2-62P-201ENST00000410868 191 ntBASIC4□□□□□ -1.77
EPHA3P29320 FAR2P2-201ENST00000413041 594 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4□□□□□ -1.77
EPHA3P29320 AL807761.1-201ENST00000417622 171 ntBASIC4□□□□□ -1.77
EPHA3P29320 AL356387.2-201ENST00000422272 243 ntBASIC4□□□□□ -1.77
EPHA3P29320 GPR143P-201ENST00000434155 205 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4□□□□□ -1.77
EPHA3P29320 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4□□□□□ -1.77
EPHA3P29320 PHBP16-201ENST00000446318 950 ntBASIC4□□□□□ -1.77
EPHA3P29320 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4□□□□□ -1.77
EPHA3P29320 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 AL049714.1-201ENST00000466686 347 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC109327.1-201ENST00000471666 403 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4□□□□□ -1.77
EPHA3P29320 AL592156.1-201ENST00000508758 304 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4□□□□□ -1.77
EPHA3P29320 RNU6-1095P-201ENST00000516148 108 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNA5SP519-201ENST00000516480 119 ntBASIC4□□□□□ -1.77
EPHA3P29320 RNA5SP143-201ENST00000516936 115 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4□□□□□ -1.77
EPHA3P29320 MTND1P35-201ENST00000526739 508 ntBASIC4□□□□□ -1.77
EPHA3P29320 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 AP003034.1-201ENST00000534621 422 ntBASIC4□□□□□ -1.77
EPHA3P29320 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4□□□□□ -1.77
EPHA3P29320 AL157687.1-201ENST00000554853 619 ntBASIC4□□□□□ -1.77
EPHA3P29320 RPL23AP87-202ENST00000573039 466 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC006254.3-201ENST00000603353 884 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC103710.2-201ENST00000609912 942 ntBASIC4□□□□□ -1.77
EPHA3P29320 RN7SL722P-201ENST00000617780 284 ntBASIC4□□□□□ -1.77
EPHA3P29320 RN7SL565P-201ENST00000618246 284 ntBASIC4□□□□□ -1.77
EPHA3P29320 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 MIR1321-201ENST00000637766 79 ntBASIC4□□□□□ -1.77
EPHA3P29320 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 Z82217.1-201ENST00000625157 8149 ntBASIC4□□□□□ -1.77
EPHA3P29320 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
EPHA3P29320 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
EPHA3P29320 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
EPHA3P29320 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.99□□□□□ -1.77
EPHA3P29320 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.99□□□□□ -1.77
EPHA3P29320 LINC02471-203ENST00000641941 4752 ntBASIC3.99□□□□□ -1.77
EPHA3P29320 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
EPHA3P29320 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
EPHA3P29320 Y_RNA.88-201ENST00000363029 99 ntBASIC3.99□□□□□ -1.77
EPHA3P29320 SNORD56.2-201ENST00000363242 71 ntBASIC3.99□□□□□ -1.77
EPHA3P29320 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
EPHA3P29320 RNU1-39P-201ENST00000383897 165 ntBASIC3.99□□□□□ -1.77
EPHA3P29320 MIR135A2-201ENST00000384854 100 ntBASIC3.99□□□□□ -1.77
EPHA3P29320 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
EPHA3P29320 CYB5AP4-201ENST00000396692 399 ntBASIC3.99□□□□□ -1.77
EPHA3P29320 AMD1P2-201ENST00000412936 992 ntBASIC3.99□□□□□ -1.77
EPHA3P29320 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.99□□□□□ -1.77
EPHA3P29320 AL137014.1-201ENST00000420490 1226 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms