Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PTPN4P29074 AL451074.6-201ENST00000608512 729 ntBASIC3.23□□□□□ -1.89
PTPN4P29074 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.23□□□□□ -1.89
PTPN4P29074 AL356585.4-201ENST00000623078 1229 ntBASIC3.23□□□□□ -1.89
PTPN4P29074 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTPN4P29074 Z83843.1-201ENST00000604070 3685 ntBASIC3.23□□□□□ -1.89
PTPN4P29074 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PTPN4P29074 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTPN4P29074 AL079305.1-201ENST00000623159 3008 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PTPN4P29074 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PTPN4P29074 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN4P29074 SNORA48.2-201ENST00000390926 124 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 RNU6-1242P-201ENST00000391052 103 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 ERHP2-201ENST00000402323 299 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AC096664.2-201ENST00000411843 406 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 BMS1P22-201ENST00000414726 313 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AC245054.2-201ENST00000415639 319 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN4P29074 MTCO2P5-201ENST00000422621 426 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PTPN4P29074 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN4P29074 USP9YP11-201ENST00000427537 717 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN4P29074 Z80107.1-201ENST00000436830 412 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 MUPP-201ENST00000438111 566 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AC006028.1-201ENST00000438379 402 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 HSPE1P28-201ENST00000443139 211 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 GAPDHP27-201ENST00000447427 1020 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 ARPC3P5-201ENST00000448802 534 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 RNA5SP310-201ENST00000459084 116 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN4P29074 COX7A2P2-201ENST00000505291 250 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN4P29074 GMPSP1-201ENST00000514075 579 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 SCARNA13-201ENST00000516672 275 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AC104986.1-201ENST00000517978 436 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN4P29074 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 MIR4276-201ENST00000584832 70 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AL391001.1-201ENST00000602747 715 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AC012669.1-201ENST00000603209 283 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AL133393.1-201ENST00000603277 287 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 BNIP3P11-201ENST00000603878 563 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC004009.2-201ENST00000623016 728 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 AC090897.3-201ENST00000636973 1157 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 CRYM-AS1-204ENST00000637983 556 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PTPN4P29074 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN4P29074 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
PTPN4P29074 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PTPN4P29074 AC005539.1-201ENST00000443768 1479 ntBASIC3.22□□□□□ -1.89
PTPN4P29074 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.21□□□□□ -1.89
PTPN4P29074 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN4P29074 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PTPN4P29074 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN4P29074 SNORA1.3-201ENST00000384676 136 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 MIR634-201ENST00000385208 97 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AL450338.1-201ENST00000407987 512 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 RPS15AP38-201ENST00000413110 372 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AC092447.6-201ENST00000414578 210 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 TMEM167AP1-201ENST00000423409 219 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AL512649.1-201ENST00000428997 581 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.21□□□□□ -1.9
PTPN4P29074 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.21□□□□□ -1.9
PTPN4P29074 RPL30P14-201ENST00000482744 348 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.21□□□□□ -1.9
PTPN4P29074 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 AC112198.1-201ENST00000505369 1220 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN4P29074 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.21□□□□□ -1.9
PTPN4P29074 RNU6-583P-201ENST00000516012 92 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.21□□□□□ -1.9
PTPN4P29074 AC022861.1-201ENST00000522981 663 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
PTPN4P29074 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 AGGF1P5-201ENST00000567900 919 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AC012493.2-201ENST00000595083 291 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AL606834.2-201ENST00000602954 668 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AL450336.1-201ENST00000605180 586 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 AC009570.1-201ENST00000609599 745 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 AC025588.4-201ENST00000615802 908 ntBASIC3.21□□□□□ -1.9
PTPN4P29074 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PTPN4P29074 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.21□□□□□ -1.9
PTPN4P29074 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms