Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 ZNF663P-202ENST00000641770 1131 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 AC010680.1-201ENST00000590024 3590 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.98□□□□□ -2.09
HLA-DMBP28068 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HLA-DMBP28068 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.98□□□□□ -2.09
HLA-DMBP28068 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AL136360.1-201ENST00000503377 1900 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 NUP58P1-201ENST00000502546 1738 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC087359.1-201ENST00000508335 1740 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 FTLP6-201ENST00000355274 422 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 ANAPC10P1-201ENST00000395991 556 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 RPS4XP7-201ENST00000406274 780 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMBP28068 RNA5SP21-201ENST00000410917 96 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 RPS20P25-201ENST00000412447 352 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC092447.6-201ENST00000414578 210 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AL158825.1-201ENST00000414735 521 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 TMEM167AP1-201ENST00000423409 219 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC019097.1-201ENST00000424783 735 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 MORF4L1P7-201ENST00000426038 703 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC010099.1-201ENST00000455434 375 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 RN7SL432P-201ENST00000484057 298 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 RPL23AP94-201ENST00000512518 302 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 RNU6-1095P-201ENST00000516148 108 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 RNU6-416P-201ENST00000516265 103 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 SNORA70.16-201ENST00000516390 95 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AL390838.2-201ENST00000602394 274 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC024560.3-201ENST00000608482 349 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC009318.4-201ENST00000620496 486 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC093536.2-201ENST00000565257 1406 ntBASIC1.97□□□□□ -2.09
HLA-DMBP28068 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DMBP28068 AC080100.1-201ENST00000624239 5356 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC026241.1-201ENST00000517873 2142 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 ZNF519P1-201ENST00000449011 1626 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 TAB3P1-202ENST00000452645 1634 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC062016.1-201ENST00000355719 319 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 RNU6-859P-201ENST00000362728 107 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AL360182.1-201ENST00000397433 468 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 RNU2-52P-201ENST00000410680 190 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AL513477.1-202ENST00000417061 214 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AL356320.2-201ENST00000417263 507 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 NUP35P1-201ENST00000422734 947 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 ARL5AP4-201ENST00000430731 512 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC004866.2-201ENST00000438285 481 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC011816.1-201ENST00000441346 546 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC007000.2-201ENST00000442564 487 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AL929288.2-201ENST00000446368 407 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 SRIP1-201ENST00000489235 288 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC034159.1-201ENST00000513885 583 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC087276.1-201ENST00000529659 480 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AP000867.2-201ENST00000532468 320 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 CKS1BP1-201ENST00000555221 240 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 AL020997.3-201ENST00000602843 359 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AL161734.1-201ENST00000609720 557 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC011890.2-201ENST00000613393 294 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 MIR1264-201ENST00000616374 69 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AL163051.2-201ENST00000618976 735 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC103798.2-201ENST00000624292 632 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 AC110079.1-202ENST00000635213 138 ntBASIC1.96□□□□□ -2.1
HLA-DMBP28068 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DMBP28068 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMBP28068 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMBP28068 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMBP28068 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMBP28068 SNORD82-201ENST00000365530 70 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AC083799.1-201ENST00000366451 910 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 MIR525-201ENST00000384978 85 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 MIR9-1-201ENST00000385198 89 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AL121978.1-201ENST00000402778 359 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms