Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC090525.3-201ENST00000605601 189 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC010338.1-201ENST00000621823 717 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC091905.1-201ENST00000624400 311 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.38□□□□□ -1.71
COL11A2P13942 LINC01109-201ENST00000603837 3081 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 IPO8P1-201ENST00000455509 3109 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 SNRPEP3-201ENST00000338402 276 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 Y_RNA.1-201ENST00000352915 104 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 FRG1CP-201ENST00000358464 769 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL11A2P13942 Y_RNA.279-201ENST00000364763 95 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
COL11A2P13942 UBA52P6-201ENST00000399822 382 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 EIF4EP1-201ENST00000422311 642 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC005534.2-201ENST00000431047 433 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.38□□□□□ -1.71
COL11A2P13942 RPL7P54-201ENST00000438336 674 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 RPS7P5-201ENST00000441482 581 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 RPL7P59-201ENST00000447700 943 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.38□□□□□ -1.71
COL11A2P13942 RPS20P20-201ENST00000460498 340 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 FTH1P24-201ENST00000503502 462 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 AP000790.1-201ENST00000528891 737 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AP003122.4-201ENST00000530980 758 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.38□□□□□ -1.71
COL11A2P13942 ARL2BPP2-201ENST00000550907 489 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 NCAPGP2-201ENST00000557911 754 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.38□□□□□ -1.71
COL11A2P13942 AC025678.1-201ENST00000567861 338 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 RPS3AP23-202ENST00000574601 686 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC060780.3-201ENST00000589464 80 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC022432.1-201ENST00000595739 310 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 CKS1BP3-201ENST00000600888 237 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC012507.3-201ENST00000603556 477 ntBASIC4.38□□□□□ -1.71
COL11A2P13942 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.38□□□□□ -1.71
COL11A2P13942 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL11A2P13942 U8.3-201ENST00000363321 132 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 RNU6-1279P-201ENST00000383917 103 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A2P13942 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.37□□□□□ -1.71
COL11A2P13942 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A2P13942 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 AC025750.2-201ENST00000442609 450 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 YWHAQP9-201ENST00000445891 512 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A2P13942 AC097493.1-201ENST00000463958 372 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.37□□□□□ -1.71
COL11A2P13942 RPS26P24-201ENST00000497656 331 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A2P13942 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A2P13942 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A2P13942 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.37□□□□□ -1.71
COL11A2P13942 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.37□□□□□ -1.71
COL11A2P13942 MIR3124-201ENST00000582636 67 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.37□□□□□ -1.71
COL11A2P13942 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.37□□□□□ -1.71
COL11A2P13942 AC007363.1-201ENST00000604736 620 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 Y_RNA.812-201ENST00000610788 101 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 Y_RNA.784-201ENST00000613803 101 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 Y_RNA.787-201ENST00000616522 101 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 Y_RNA.780-201ENST00000617336 101 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 Y_RNA.801-201ENST00000619005 101 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 AL445264.1-201ENST00000621719 171 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 AC006386.2-201ENST00000624491 75 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 AC012005.1-201ENST00000624575 75 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.37□□□□□ -1.71
COL11A2P13942 AC026634.1-201ENST00000634369 198 ntBASIC4.37□□□□□ -1.71
COL11A2P13942 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.37□□□□□ -1.71
COL11A2P13942 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
COL11A2P13942 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.37□□□□□ -1.71
COL11A2P13942 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL11A2P13942 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.37□□□□□ -1.71
COL11A2P13942 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
COL11A2P13942 OR4G11P-202ENST00000642116 1414 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.36□□□□□ -1.71
COL11A2P13942 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.36□□□□□ -1.71
COL11A2P13942 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.36□□□□□ -1.71
COL11A2P13942 SNORD116-23-201ENST00000384645 92 ntBASIC4.36□□□□□ -1.71
COL11A2P13942 AL034374.1-201ENST00000406329 351 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms