Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNU6-354P-201ENST00000383862 107 ntBASIC3.22□□□□□ -1.89
TOP1P11387 RNU6-610P-201ENST00000384264 107 ntBASIC3.22□□□□□ -1.89
TOP1P11387 RNU6-1257P-201ENST00000384625 110 ntBASIC3.22□□□□□ -1.89
TOP1P11387 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TOP1P11387 AL136372.1-201ENST00000403060 228 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AC092447.6-201ENST00000414578 210 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AC104332.2-201ENST00000429959 156 ntBASIC3.22□□□□□ -1.89
TOP1P11387 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TOP1P11387 AL031183.1-201ENST00000457667 207 ntBASIC3.22□□□□□ -1.89
TOP1P11387 SETP11-201ENST00000473027 690 ntBASIC3.22□□□□□ -1.89
TOP1P11387 RN7SL499P-201ENST00000481141 276 ntBASIC3.22□□□□□ -1.89
TOP1P11387 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.22□□□□□ -1.89
TOP1P11387 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.22□□□□□ -1.89
TOP1P11387 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TOP1P11387 AP000857.1-201ENST00000532151 543 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.22□□□□□ -1.89
TOP1P11387 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.22□□□□□ -1.89
TOP1P11387 MIR4319-201ENST00000577285 85 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.22□□□□□ -1.89
TOP1P11387 AC023043.3-201ENST00000593113 385 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.22□□□□□ -1.89
TOP1P11387 NUTF2P8-201ENST00000604593 363 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AF129408.1-201ENST00000608767 431 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AC008083.4-201ENST00000615076 444 ntBASIC3.22□□□□□ -1.89
TOP1P11387 AC007275.1-201ENST00000621243 671 ntBASIC3.22□□□□□ -1.89
TOP1P11387 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.22□□□□□ -1.89
TOP1P11387 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.22□□□□□ -1.89
TOP1P11387 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TOP1P11387 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.22□□□□□ -1.89
TOP1P11387 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
TOP1P11387 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.21□□□□□ -1.89
TOP1P11387 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.21□□□□□ -1.9
TOP1P11387 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TOP1P11387 AC062016.1-201ENST00000355719 319 ntBASIC3.21□□□□□ -1.9
TOP1P11387 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 SNORD65C-201ENST00000390962 71 ntBASIC3.21□□□□□ -1.9
TOP1P11387 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 AL354692.1-201ENST00000423044 315 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AC013262.1-201ENST00000426710 252 ntBASIC3.21□□□□□ -1.9
TOP1P11387 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 RPL31P54-201ENST00000429803 370 ntBASIC3.21□□□□□ -1.9
TOP1P11387 SETP8-201ENST00000435341 628 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.21□□□□□ -1.9
TOP1P11387 MUPP-201ENST00000438111 566 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AC004866.2-201ENST00000438285 481 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.21□□□□□ -1.9
TOP1P11387 RPL7P55-201ENST00000450522 746 ntBASIC3.21□□□□□ -1.9
TOP1P11387 NDUFA5P7-201ENST00000452914 242 ntBASIC3.21□□□□□ -1.9
TOP1P11387 MTATP6P14-201ENST00000455189 673 ntBASIC3.21□□□□□ -1.9
TOP1P11387 GTF2IP12-201ENST00000456547 356 ntBASIC3.21□□□□□ -1.9
TOP1P11387 FCF1P6-201ENST00000456841 595 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 RPS29P12-201ENST00000460178 152 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AC008379.1-201ENST00000463655 464 ntBASIC3.21□□□□□ -1.9
TOP1P11387 DYNLL1P6-201ENST00000503440 264 ntBASIC3.21□□□□□ -1.9
TOP1P11387 CBX3P3-201ENST00000508108 532 ntBASIC3.21□□□□□ -1.9
TOP1P11387 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.21□□□□□ -1.9
TOP1P11387 AC034159.1-201ENST00000513885 583 ntBASIC3.21□□□□□ -1.9
TOP1P11387 RNU5A-7P-201ENST00000515979 116 ntBASIC3.21□□□□□ -1.9
TOP1P11387 RNU6-56P-201ENST00000516986 93 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TOP1P11387 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
TOP1P11387 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.21□□□□□ -1.9
TOP1P11387 AL157394.1-201ENST00000562983 1224 ntBASIC3.21□□□□□ -1.9
TOP1P11387 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 AC078899.3-201ENST00000599065 212 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AC068620.3-201ENST00000602749 560 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AC007619.2-201ENST00000605743 379 ntBASIC3.21□□□□□ -1.9
TOP1P11387 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.21□□□□□ -1.9
TOP1P11387 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.21□□□□□ -1.9
TOP1P11387 BX649567.1-201ENST00000642071 1134 ntBASIC3.21□□□□□ -1.9
TOP1P11387 MTND4P9-201ENST00000507819 1346 ntBASIC3.2□□□□□ -1.9
TOP1P11387 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.2□□□□□ -1.9
TOP1P11387 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
TOP1P11387 RNA5SP252-201ENST00000391131 119 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AL024474.1-201ENST00000404655 591 ntBASIC3.2□□□□□ -1.9
TOP1P11387 RNA5SP184-201ENST00000411071 108 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.2□□□□□ -1.9
TOP1P11387 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.2□□□□□ -1.9
TOP1P11387 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.2□□□□□ -1.9
TOP1P11387 RNF2P1-201ENST00000442955 1010 ntBASIC3.2□□□□□ -1.9
TOP1P11387 HSFY3P-201ENST00000444242 1191 ntBASIC3.2□□□□□ -1.9
TOP1P11387 GSTA11P-201ENST00000452866 669 ntBASIC3.2□□□□□ -1.9
TOP1P11387 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.2□□□□□ -1.9
TOP1P11387 CDC42P1-201ENST00000456658 548 ntBASIC3.2□□□□□ -1.9
TOP1P11387 SNORD109B-201ENST00000458961 67 ntBASIC3.2□□□□□ -1.9
TOP1P11387 SNORD109A-201ENST00000459128 67 ntBASIC3.2□□□□□ -1.9
TOP1P11387 SNORA59A-201ENST00000459326 152 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.2□□□□□ -1.9
TOP1P11387 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.2□□□□□ -1.9
TOP1P11387 MTATP6P9-201ENST00000515039 680 ntBASIC3.2□□□□□ -1.9
TOP1P11387 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.2□□□□□ -1.9
TOP1P11387 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.2□□□□□ -1.9
TOP1P11387 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.2□□□□□ -1.9
TOP1P11387 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms