Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.11□□□□□ -2.07
COL4A2P08572 MIR6132-201ENST00000622083 109 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AL355578.1-201ENST00000607405 1328 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A2P08572 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A2P08572 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A2P08572 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
COL4A2P08572 AL589826.1-201ENST00000340697 249 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 ARL2BPP3-201ENST00000421226 480 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AC007000.2-201ENST00000442564 487 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 AL513343.1-201ENST00000451818 792 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AP000873.1-201ENST00000463987 400 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 IGHV3-76-201ENST00000522465 295 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 MTND2P26-201ENST00000528255 1029 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 GNAI2P1-201ENST00000541815 315 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC095057.3-201ENST00000567102 1157 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.11□□□□□ -2.07
COL4A2P08572 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 AL009028.1-201ENST00000604895 802 ntBASIC2.11□□□□□ -2.07
COL4A2P08572 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.11□□□□□ -2.07
COL4A2P08572 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL4A2P08572 MTND4P35-201ENST00000604257 1375 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL4A2P08572 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.1□□□□□ -2.07
COL4A2P08572 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL4A2P08572 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL4A2P08572 RNU2-21P-201ENST00000410368 188 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AF274854.1-201ENST00000413236 615 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 PRELID3BP11-201ENST00000414230 479 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 Z82205.1-201ENST00000428456 297 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A2P08572 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A2P08572 AC004865.1-201ENST00000442276 1003 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.1□□□□□ -2.07
COL4A2P08572 TPRKBP1-201ENST00000456243 481 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL4A2P08572 RPL38P4-201ENST00000502376 214 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AP003717.3-201ENST00000544832 1180 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AMZ2P1-203ENST00000565833 850 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AC006270.2-201ENST00000578523 652 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AP001180.3-201ENST00000582221 145 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A2P08572 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.1□□□□□ -2.07
COL4A2P08572 AL353997.5-201ENST00000618886 171 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 AC022079.2-201ENST00000619739 566 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.1□□□□□ -2.07
COL4A2P08572 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
COL4A2P08572 AC017104.5-201ENST00000637647 639 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL4A2P08572 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.1□□□□□ -2.07
COL4A2P08572 SEC63P2-201ENST00000503863 1939 ntBASIC2.1□□□□□ -2.07
COL4A2P08572 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.09□□□□□ -2.07
COL4A2P08572 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
COL4A2P08572 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL4A2P08572 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL4A2P08572 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 HSPE1P26-201ENST00000405341 275 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 UBE2V1P11-201ENST00000411559 285 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.09□□□□□ -2.07
COL4A2P08572 AL691517.1-201ENST00000440833 1235 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.09□□□□□ -2.07
COL4A2P08572 USP9YP8-201ENST00000441913 500 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 Z77249.1-201ENST00000444622 1175 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.09□□□□□ -2.07
COL4A2P08572 MTND2P3-201ENST00000452458 470 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.09□□□□□ -2.07
COL4A2P08572 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.09□□□□□ -2.07
COL4A2P08572 AC008885.2-201ENST00000509506 930 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 RNA5SP309-201ENST00000516670 106 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 SNORA31.15-201ENST00000516771 132 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 AC087241.2-201ENST00000535801 324 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 OR11H5P-201ENST00000554039 926 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.09□□□□□ -2.07
COL4A2P08572 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 AC131902.3-201ENST00000611767 581 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 AC091834.1-201ENST00000614543 472 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 MTND4P21-201ENST00000453886 1357 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 MTCO1P18-201ENST00000455518 1419 ntBASIC2.09□□□□□ -2.07
COL4A2P08572 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
COL4A2P08572 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
COL4A2P08572 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.09□□□□□ -2.08
COL4A2P08572 SNORA51.12-201ENST00000384448 134 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 MIR9-3-201ENST00000385084 90 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 CYCSP49-201ENST00000420810 319 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 MORF4L1P7-201ENST00000426038 703 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A2P08572 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.08□□□□□ -2.08
COL4A2P08572 TVP23BP2-201ENST00000455082 615 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 AC117522.2-201ENST00000510049 657 ntBASIC2.08□□□□□ -2.08
COL4A2P08572 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms