Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC104260.2-201ENST00000623551 3497 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFAP04085 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFAP04085 AC092376.2-201ENST00000622621 4116 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 THAP12P9-201ENST00000503971 2360 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFAP04085 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFAP04085 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.22□□□□□ -1.57
PDGFAP04085 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFAP04085 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFAP04085 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PDGFAP04085 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PDGFAP04085 Y_RNA.152-201ENST00000363578 100 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 Y_RNA.424-201ENST00000384063 103 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 SNORA51.8-201ENST00000384234 132 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 RNU6-842P-201ENST00000384269 107 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC009310.1-201ENST00000414414 451 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 PSMD10P3-201ENST00000437000 448 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC011816.1-201ENST00000441346 546 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.22□□□□□ -1.57
PDGFAP04085 IFNWP4-201ENST00000453148 294 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 PCMTD1P1-201ENST00000455560 355 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 RPL7AP6-201ENST00000477943 801 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 RPSAP50-201ENST00000481955 852 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 RN7SL570P-201ENST00000484405 292 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 RPS21P4-201ENST00000487122 248 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 RN7SL283P-201ENST00000489055 303 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFAP04085 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFAP04085 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFAP04085 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.22□□□□□ -1.57
PDGFAP04085 SNRPGP16-201ENST00000533275 226 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.22□□□□□ -1.57
PDGFAP04085 SUB1P3-201ENST00000564581 315 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC109446.1-201ENST00000566172 220 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 MIR548AC-201ENST00000585049 88 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC018889.1-201ENST00000605372 397 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 SNORD91B-202ENST00000608459 222 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC005344.1-201ENST00000613391 459 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AC068870.2-201ENST00000620635 389 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 AL606534.2-204ENST00000635008 178 ntBASIC5.22□□□□□ -1.57
PDGFAP04085 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
PDGFAP04085 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDGFAP04085 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDGFAP04085 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PDGFAP04085 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.21□□□□□ -1.57
PDGFAP04085 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PDGFAP04085 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
PDGFAP04085 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PDGFAP04085 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PDGFAP04085 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PDGFAP04085 EOGT-210ENST00000615922 1931 ntBASIC5.21□□□□□ -1.57
PDGFAP04085 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PDGFAP04085 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
PDGFAP04085 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.21□□□□□ -1.58
PDGFAP04085 RPL23P2-201ENST00000320371 421 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 Y_RNA.151-201ENST00000363566 112 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 RNA5SP30-201ENST00000365552 115 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AC096921.1-201ENST00000411661 375 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFAP04085 AC011933.1-201ENST00000413334 321 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.21□□□□□ -1.58
PDGFAP04085 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.21□□□□□ -1.58
PDGFAP04085 HMGB1P9-201ENST00000429856 646 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.21□□□□□ -1.58
PDGFAP04085 RN7SL860P-201ENST00000473738 223 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 RPS15AP34-201ENST00000487776 387 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AC018437.1-201ENST00000492214 406 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFAP04085 VN1R104P-201ENST00000505115 1009 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFAP04085 AC087369.1-201ENST00000520775 996 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AC007991.1-201ENST00000522680 631 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.21□□□□□ -1.58
PDGFAP04085 AC126177.5-201ENST00000549599 178 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AL121603.1-201ENST00000553815 142 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AC068446.3-201ENST00000555285 382 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFAP04085 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFAP04085 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.21□□□□□ -1.58
PDGFAP04085 MIR3691-201ENST00000578066 90 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 MIR4458-201ENST00000578872 75 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 MIR132-201ENST00000591554 101 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.21□□□□□ -1.58
PDGFAP04085 HMGN2P28-201ENST00000606102 262 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 AL078621.3-201ENST00000623707 2042 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PDGFAP04085 AC091812.1-201ENST00000432235 1948 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 IRF5P1-201ENST00000504852 2164 ntBASIC5.21□□□□□ -1.58
PDGFAP04085 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PDGFAP04085 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms