Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL831737.1-201ENST00000441288 271 ntBASIC3.45□□□□□ -1.86
VTNP04004 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.45□□□□□ -1.86
VTNP04004 Z99127.3-201ENST00000448158 395 ntBASIC3.45□□□□□ -1.86
VTNP04004 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.45□□□□□ -1.86
VTNP04004 OR6C5P-201ENST00000452388 923 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC097493.1-201ENST00000463958 372 ntBASIC3.45□□□□□ -1.86
VTNP04004 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.45□□□□□ -1.86
VTNP04004 AC078918.1-201ENST00000498515 228 ntBASIC3.45□□□□□ -1.86
VTNP04004 TMEM251P1-201ENST00000503717 318 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.45□□□□□ -1.86
VTNP04004 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
VTNP04004 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.45□□□□□ -1.86
VTNP04004 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.45□□□□□ -1.86
VTNP04004 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.45□□□□□ -1.86
VTNP04004 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.45□□□□□ -1.86
VTNP04004 Y_RNA.688-201ENST00000516565 95 ntBASIC3.45□□□□□ -1.86
VTNP04004 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.45□□□□□ -1.86
VTNP04004 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC239860.2-201ENST00000525886 270 ntBASIC3.45□□□□□ -1.86
VTNP04004 PSMA2P1-201ENST00000526365 646 ntBASIC3.45□□□□□ -1.86
VTNP04004 RFPL1S-203ENST00000539579 330 ntBASIC3.45□□□□□ -1.86
VTNP04004 CYCSP2-201ENST00000558168 301 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.45□□□□□ -1.86
VTNP04004 AC109446.2-201ENST00000567872 497 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.45□□□□□ -1.86
VTNP04004 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.45□□□□□ -1.86
VTNP04004 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.45□□□□□ -1.86
VTNP04004 AP000811.1-201ENST00000603803 651 ntBASIC3.45□□□□□ -1.86
VTNP04004 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.45□□□□□ -1.86
VTNP04004 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.45□□□□□ -1.86
VTNP04004 AF117829.1-206ENST00000621883 3802 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC079248.2-201ENST00000623779 326 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC091903.1-201ENST00000624322 454 ntBASIC3.45□□□□□ -1.86
VTNP04004 AC007494.3-201ENST00000624660 743 ntBASIC3.45□□□□□ -1.86
VTNP04004 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.45□□□□□ -1.86
VTNP04004 MTND4P34-201ENST00000572715 1371 ntBASIC3.45□□□□□ -1.86
VTNP04004 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VTNP04004 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.45□□□□□ -1.86
VTNP04004 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTNP04004 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTNP04004 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VTNP04004 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
VTNP04004 AL157700.1-201ENST00000561973 1432 ntBASIC3.44□□□□□ -1.86
VTNP04004 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.44□□□□□ -1.86
VTNP04004 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VTNP04004 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.44□□□□□ -1.86
VTNP04004 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.44□□□□□ -1.86
VTNP04004 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.44□□□□□ -1.86
VTNP04004 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.44□□□□□ -1.86
VTNP04004 RNU6-989P-201ENST00000362756 107 ntBASIC3.44□□□□□ -1.86
VTNP04004 AP002088.1-201ENST00000382740 395 ntBASIC3.44□□□□□ -1.86
VTNP04004 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VTNP04004 SNORD67-201ENST00000390833 111 ntBASIC3.44□□□□□ -1.86
VTNP04004 EI24P1-201ENST00000416584 867 ntBASIC3.44□□□□□ -1.86
VTNP04004 FNDC3CP-201ENST00000420795 1155 ntBASIC3.44□□□□□ -1.86
VTNP04004 AC090960.1-201ENST00000421072 306 ntBASIC3.44□□□□□ -1.86
VTNP04004 AL953862.1-201ENST00000423016 168 ntBASIC3.44□□□□□ -1.86
VTNP04004 AL035407.1-201ENST00000429211 571 ntBASIC3.44□□□□□ -1.86
VTNP04004 MTCYBP39-201ENST00000437562 491 ntBASIC3.44□□□□□ -1.86
VTNP04004 AC016696.1-201ENST00000446949 318 ntBASIC3.44□□□□□ -1.86
VTNP04004 EEF1E1P1-201ENST00000446998 430 ntBASIC3.44□□□□□ -1.86
VTNP04004 snoU13.3-201ENST00000459441 104 ntBASIC3.44□□□□□ -1.86
VTNP04004 PABPC1P3-201ENST00000469174 459 ntBASIC3.44□□□□□ -1.86
VTNP04004 RPS3AP14-201ENST00000483907 780 ntBASIC3.44□□□□□ -1.86
VTNP04004 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VTNP04004 AC005921.1-201ENST00000510589 286 ntBASIC3.44□□□□□ -1.86
VTNP04004 LTV1P1-201ENST00000510683 1237 ntBASIC3.44□□□□□ -1.86
VTNP04004 FTH1P9-201ENST00000513251 355 ntBASIC3.44□□□□□ -1.86
VTNP04004 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.44□□□□□ -1.86
VTNP04004 RNU6-1231P-201ENST00000517185 103 ntBASIC3.44□□□□□ -1.86
VTNP04004 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VTNP04004 AP003385.6-201ENST00000531603 374 ntBASIC3.44□□□□□ -1.86
VTNP04004 AP002404.1-201ENST00000532005 451 ntBASIC3.44□□□□□ -1.86
VTNP04004 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.44□□□□□ -1.86
VTNP04004 AC009101.1-201ENST00000568135 242 ntBASIC3.44□□□□□ -1.86
VTNP04004 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
VTNP04004 AL355812.1-201ENST00000603215 216 ntBASIC3.44□□□□□ -1.86
VTNP04004 AC121247.2-201ENST00000604776 136 ntBASIC3.44□□□□□ -1.86
VTNP04004 AC010738.1-201ENST00000604970 987 ntBASIC3.44□□□□□ -1.86
VTNP04004 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.44□□□□□ -1.86
VTNP04004 AC008121.2-201ENST00000614647 523 ntBASIC3.44□□□□□ -1.86
VTNP04004 AL031667.3-201ENST00000620124 655 ntBASIC3.44□□□□□ -1.86
VTNP04004 AC009318.4-201ENST00000620496 486 ntBASIC3.44□□□□□ -1.86
VTNP04004 AL356596.1-201ENST00000624230 379 ntBASIC3.44□□□□□ -1.86
VTNP04004 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.44□□□□□ -1.86
VTNP04004 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.44□□□□□ -1.86
VTNP04004 PWAR6-201ENST00000552334 4618 ntBASIC3.44□□□□□ -1.86
VTNP04004 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.44□□□□□ -1.86
VTNP04004 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VTNP04004 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VTNP04004 AL365361.1-201ENST00000566942 3481 ntBASIC3.43□□□□□ -1.86
VTNP04004 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VTNP04004 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VTNP04004 RNU6-553P-201ENST00000364047 96 ntBASIC3.43□□□□□ -1.86
VTNP04004 RNU1-140P-201ENST00000365040 165 ntBASIC3.43□□□□□ -1.86
VTNP04004 SNORD15B-201ENST00000384714 146 ntBASIC3.43□□□□□ -1.86
VTNP04004 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VTNP04004 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.43□□□□□ -1.86
VTNP04004 RNA5SP56-201ENST00000410277 118 ntBASIC3.43□□□□□ -1.86
VTNP04004 RNU6-55P-201ENST00000411092 107 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms