Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL353748.2-201ENST00000622148 471 ntBASIC1.64□□□□□ -2.15
SPTA1P02549 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SPTA1P02549 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SPTA1P02549 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SPTA1P02549 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.63□□□□□ -2.15
SPTA1P02549 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.63□□□□□ -2.15
SPTA1P02549 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.63□□□□□ -2.15
SPTA1P02549 RPS27P5-201ENST00000444247 244 ntBASIC1.63□□□□□ -2.15
SPTA1P02549 AP000705.1-201ENST00000454567 350 ntBASIC1.63□□□□□ -2.15
SPTA1P02549 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC1.63□□□□□ -2.15
SPTA1P02549 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.63□□□□□ -2.15
SPTA1P02549 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
SPTA1P02549 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
SPTA1P02549 SNORA62.2-201ENST00000364672 152 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SPTA1P02549 MIR1294-201ENST00000408503 142 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.62□□□□□ -2.15
SPTA1P02549 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.62□□□□□ -2.15
SPTA1P02549 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.62□□□□□ -2.15
SPTA1P02549 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.62□□□□□ -2.15
SPTA1P02549 RNU6-1223P-201ENST00000517124 104 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 AC008015.1-201ENST00000555505 465 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 MIR3670-2-201ENST00000582974 65 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 MIR3670-1-201ENST00000584160 65 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 MIR3670-3-201ENST00000584855 65 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 MIR3670-4-201ENST00000612260 65 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SPTA1P02549 MIR96-201ENST00000362288 78 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 SAR1AP2-201ENST00000392696 594 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 AC244505.5-201ENST00000443639 207 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 RPL23AP20-201ENST00000447965 421 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 RPS29P1-201ENST00000465274 159 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.62□□□□□ -2.15
SPTA1P02549 AC034244.1-201ENST00000507687 207 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.62□□□□□ -2.15
SPTA1P02549 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.62□□□□□ -2.15
SPTA1P02549 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.62□□□□□ -2.15
SPTA1P02549 AC010678.1-201ENST00000614118 713 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 AC010297.1-201ENST00000623948 149 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 BX649567.1-201ENST00000642071 1134 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 MTND4P23-201ENST00000447723 1363 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.62□□□□□ -2.15
SPTA1P02549 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SPTA1P02549 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SPTA1P02549 AC005336.3-201ENST00000623833 2679 ntBASIC1.62□□□□□ -2.15
SPTA1P02549 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.61□□□□□ -2.15
SPTA1P02549 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 AL138785.1-201ENST00000425821 331 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 AC079776.3-201ENST00000450665 370 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 RPL31P41-201ENST00000477967 372 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SPTA1P02549 AC013562.2-201ENST00000611632 603 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 HPVC1-201ENST00000629899 1198 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 MIR6715B-201ENST00000637172 77 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SPTA1P02549 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SPTA1P02549 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.61□□□□□ -2.15
SPTA1P02549 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.61□□□□□ -2.15
SPTA1P02549 AC129850.1-201ENST00000436203 508 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
SPTA1P02549 FABP5P5-201ENST00000515537 406 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.61□□□□□ -2.15
SPTA1P02549 AC006023.2-201ENST00000609916 167 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 AC105429.2-201ENST00000610567 517 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SPTA1P02549 AL157834.3-201ENST00000615543 103 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 AL133216.2-202ENST00000634512 349 ntBASIC1.61□□□□□ -2.15
SPTA1P02549 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SPTA1P02549 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SPTA1P02549 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 RNU2-22P-201ENST00000411266 212 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.6□□□□□ -2.15
SPTA1P02549 CALM1P2-201ENST00000452941 448 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.6□□□□□ -2.15
SPTA1P02549 RPS3AP23-202ENST00000574601 686 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 MAGOH2P-202ENST00000584384 429 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AP000787.2-201ENST00000604432 568 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.6□□□□□ -2.15
SPTA1P02549 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.6□□□□□ -2.15
SPTA1P02549 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.6□□□□□ -2.15
SPTA1P02549 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
SPTA1P02549 OR4G11P-202ENST00000642116 1414 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AC092881.1-201ENST00000638218 2733 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 SNORA26.7-201ENST00000391288 122 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AL627390.1-201ENST00000396055 340 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.6□□□□□ -2.15
SPTA1P02549 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.6□□□□□ -2.15
SPTA1P02549 AC022634.1-201ENST00000520765 532 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 AC016957.1-201ENST00000534895 309 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 MIR4506-201ENST00000584693 77 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 MIR5002-201ENST00000584713 97 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 VIS1.1-201ENST00000610517 203 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 VN1R74P-201ENST00000613259 503 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.6□□□□□ -2.15
SPTA1P02549 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SPTA1P02549 AC091152.2-201ENST00000591628 2569 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 RNU4-41P-201ENST00000364426 143 ntBASIC1.59□□□□□ -2.15
SPTA1P02549 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms