Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 DUXAP11-201ENST00000603858 526 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC012443.1-201ENST00000605605 231 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 MIR3670-4-201ENST00000612260 65 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AL020991.1-201ENST00000612314 373 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC039056.2-201ENST00000622261 511 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AC116618.1-201ENST00000634617 774 ntBASIC2.29□□□□□ -2.04
HLA-DQA1P01909 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HLA-DQA1P01909 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 MAPK10-322ENST00000641485 4530 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AL513185.3-201ENST00000433335 1300 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 OR5BR1P-201ENST00000524992 1330 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 FRG1BP-201ENST00000278882 761 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 Y_RNA.192-201ENST00000363977 102 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 MIR493-201ENST00000385254 89 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC110754.1-201ENST00000399740 601 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AL096701.2-201ENST00000416920 238 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 USP9YP11-201ENST00000427537 717 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 CYCSP4-201ENST00000429682 331 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 MTCYBP34-201ENST00000439552 670 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 RPL21P23-201ENST00000446654 460 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 RPL26P28-201ENST00000451325 435 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 ELOCP23-201ENST00000452014 332 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 BX322784.1-201ENST00000455793 1077 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 SNORA84-201ENST00000459229 133 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 FTH1P2-201ENST00000466086 412 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 RPL31P50-201ENST00000471002 296 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC021146.8-201ENST00000507455 733 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 RN7SKP157-201ENST00000516174 282 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 OR5B10P-201ENST00000532869 642 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC004486.1-201ENST00000546846 233 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC011611.1-201ENST00000552179 197 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AL162713.1-201ENST00000604480 262 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC008962.1-201ENST00000605729 304 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AL596245.1-201ENST00000618994 362 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC012442.3-202ENST00000636742 206 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC009093.8-201ENST00000641769 292 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HLA-DQA1P01909 AC009812.4-201ENST00000569134 1805 ntBASIC2.28□□□□□ -2.04
HLA-DQA1P01909 TAB3P1-202ENST00000452645 1634 ntBASIC2.28□□□□□ -2.05
HLA-DQA1P01909 MTCO1P12-201ENST00000414273 1543 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AL356473.1-201ENST00000406203 1408 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC092435.3-201ENST00000565538 3654 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 RNU6-28P-201ENST00000362378 107 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 RNU6-173P-201ENST00000364215 104 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 RNU4-68P-201ENST00000364314 141 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 RPL23AP29-201ENST00000397284 453 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 MTCO2P5-201ENST00000422621 426 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 NANOGP5-201ENST00000424456 877 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC092648.1-201ENST00000425870 423 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC024082.2-201ENST00000434771 238 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 MTND4P6-201ENST00000438297 472 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 SDCBPP1-201ENST00000440192 890 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC092641.1-201ENST00000440229 772 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC004854.1-201ENST00000440356 349 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 RNA5SP310-201ENST00000459084 116 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC097493.1-201ENST00000463958 372 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 RN7SL20P-201ENST00000488827 297 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC079395.1-201ENST00000510981 262 ntBASIC2.27□□□□□ -2.05
HLA-DQA1P01909 AC116353.3-201ENST00000511215 249 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms