Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MTCO1P14-201ENST00000441695 1559 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 Y_RNA.112-201ENST00000363250 102 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 NCSTNP1-201ENST00000406229 144 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.62□□□□□ -1.99
POLR1AO95602 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.62□□□□□ -1.99
POLR1AO95602 AL138799.3-201ENST00000438968 350 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 RPL23AP55-201ENST00000498163 452 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.62□□□□□ -1.99
POLR1AO95602 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.62□□□□□ -1.99
POLR1AO95602 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.62□□□□□ -1.99
POLR1AO95602 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
POLR1AO95602 AL353748.2-201ENST00000622148 471 ntBASIC2.62□□□□□ -1.99
POLR1AO95602 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.61□□□□□ -1.99
POLR1AO95602 MOB1AP2-201ENST00000446060 614 ntBASIC2.61□□□□□ -1.99
POLR1AO95602 RAC1P5-201ENST00000512182 576 ntBASIC2.61□□□□□ -1.99
POLR1AO95602 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.61□□□□□ -1.99
POLR1AO95602 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.61□□□□□ -1.99
POLR1AO95602 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.61□□□□□ -1.99
POLR1AO95602 AC068446.3-201ENST00000555285 382 ntBASIC2.61□□□□□ -1.99
POLR1AO95602 AL354943.1-201ENST00000572103 781 ntBASIC2.61□□□□□ -1.99
POLR1AO95602 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.61□□□□□ -1.99
POLR1AO95602 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
POLR1AO95602 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
POLR1AO95602 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.6□□□□□ -1.99
POLR1AO95602 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR1AO95602 VN1R31P-201ENST00000417498 730 ntBASIC2.6□□□□□ -1.99
POLR1AO95602 SEC63P1-201ENST00000425785 1258 ntBASIC2.6□□□□□ -1.99
POLR1AO95602 FO393414.1-201ENST00000428697 1184 ntBASIC2.6□□□□□ -1.99
POLR1AO95602 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
POLR1AO95602 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.6□□□□□ -1.99
POLR1AO95602 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.6□□□□□ -1.99
POLR1AO95602 AC090751.1-201ENST00000566966 267 ntBASIC2.6□□□□□ -1.99
POLR1AO95602 AC103987.3-201ENST00000582071 292 ntBASIC2.6□□□□□ -1.99
POLR1AO95602 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.6□□□□□ -1.99
POLR1AO95602 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
POLR1AO95602 UBE2L2-201ENST00000254302 429 ntBASIC2.59□□□□□ -1.99
POLR1AO95602 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
POLR1AO95602 MIR1323-201ENST00000408090 73 ntBASIC2.59□□□□□ -1.99
POLR1AO95602 AC067805.1-201ENST00000559344 470 ntBASIC2.59□□□□□ -1.99
POLR1AO95602 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
POLR1AO95602 HSPE1P11-201ENST00000339579 310 ntBASIC2.59□□□□□ -2
POLR1AO95602 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.59□□□□□ -2
POLR1AO95602 AC009302.1-201ENST00000417147 390 ntBASIC2.59□□□□□ -2
POLR1AO95602 EIF1AXP1-201ENST00000419267 435 ntBASIC2.59□□□□□ -2
POLR1AO95602 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.59□□□□□ -2
POLR1AO95602 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.59□□□□□ -2
POLR1AO95602 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.59□□□□□ -2
POLR1AO95602 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
POLR1AO95602 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
POLR1AO95602 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
POLR1AO95602 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.58□□□□□ -2
POLR1AO95602 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.58□□□□□ -2
POLR1AO95602 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
POLR1AO95602 SET-203ENST00000372688 801 ntTSL 2 BASIC2.58□□□□□ -2
POLR1AO95602 AC234782.4-201ENST00000417646 1048 ntBASIC2.58□□□□□ -2
POLR1AO95602 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.58□□□□□ -2
POLR1AO95602 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.58□□□□□ -2
POLR1AO95602 TOMM22P6-201ENST00000465035 409 ntBASIC2.58□□□□□ -2
POLR1AO95602 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.58□□□□□ -2
POLR1AO95602 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
POLR1AO95602 MIR5089-201ENST00000580047 84 ntBASIC2.58□□□□□ -2
POLR1AO95602 AC098848.2-201ENST00000588023 330 ntBASIC2.58□□□□□ -2
POLR1AO95602 VN1R74P-201ENST00000613259 503 ntBASIC2.58□□□□□ -2
POLR1AO95602 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.58□□□□□ -2
POLR1AO95602 AC011978.2-201ENST00000569835 2054 ntBASIC2.58□□□□□ -2
POLR1AO95602 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.57□□□□□ -2
POLR1AO95602 MTND5P35-201ENST00000557537 1720 ntBASIC2.57□□□□□ -2
POLR1AO95602 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.57□□□□□ -2
POLR1AO95602 AL391987.6-201ENST00000305671 199 ntBASIC2.57□□□□□ -2
POLR1AO95602 RNU4-52P-201ENST00000384209 138 ntBASIC2.57□□□□□ -2
POLR1AO95602 RNU4-74P-201ENST00000411280 161 ntBASIC2.57□□□□□ -2
POLR1AO95602 HMGB1P27-201ENST00000431429 603 ntBASIC2.57□□□□□ -2
POLR1AO95602 AL353597.2-202ENST00000434901 373 ntBASIC2.57□□□□□ -2
POLR1AO95602 IFNWP4-201ENST00000453148 294 ntBASIC2.57□□□□□ -2
POLR1AO95602 IGLV3-17-201ENST00000519099 244 ntBASIC2.57□□□□□ -2
POLR1AO95602 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.57□□□□□ -2
POLR1AO95602 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.57□□□□□ -2
POLR1AO95602 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
POLR1AO95602 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.57□□□□□ -2
POLR1AO95602 C2orf27A-204ENST00000623058 969 ntBASIC2.57□□□□□ -2
POLR1AO95602 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
POLR1AO95602 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
POLR1AO95602 PIGFP3-201ENST00000441918 722 ntBASIC2.56□□□□□ -2
POLR1AO95602 OR8X1P-201ENST00000534542 869 ntBASIC2.56□□□□□ -2
POLR1AO95602 CBX3P4-201ENST00000538909 354 ntBASIC2.56□□□□□ -2
POLR1AO95602 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.56□□□□□ -2
POLR1AO95602 AC000123.2-201ENST00000623124 461 ntBASIC2.56□□□□□ -2
POLR1AO95602 AC233981.2-201ENST00000611524 1614 ntBASIC2.56□□□□□ -2
POLR1AO95602 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.56□□□□□ -2
POLR1AO95602 AC009965.2-201ENST00000425328 970 ntBASIC2.56□□□□□ -2
POLR1AO95602 AC080013.2-201ENST00000460866 323 ntBASIC2.56□□□□□ -2
POLR1AO95602 RPS15AP17-201ENST00000470598 390 ntBASIC2.56□□□□□ -2
POLR1AO95602 AC107393.1-201ENST00000512403 346 ntBASIC2.56□□□□□ -2
POLR1AO95602 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.56□□□□□ -2
POLR1AO95602 PTP4A1P6-201ENST00000531034 478 ntBASIC2.56□□□□□ -2
POLR1AO95602 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
POLR1AO95602 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
POLR1AO95602 AL035405.1-201ENST00000400795 710 ntBASIC2.55□□□□□ -2
POLR1AO95602 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.55□□□□□ -2
POLR1AO95602 ARL4AP2-201ENST00000507378 601 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 149.5 ms