Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MTCYBP12-201ENST00000440559 1134 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 GZMAP1-201ENST00000503054 631 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 AC108078.2-201ENST00000510750 236 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA1O95477 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.64□□□□□ -2.15
ABCA1O95477 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA1O95477 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.64□□□□□ -2.15
ABCA1O95477 OR4T1P-201ENST00000554933 911 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 CENPUP2-201ENST00000555897 1186 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 AC090897.3-201ENST00000636973 1157 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA1O95477 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.64□□□□□ -2.15
ABCA1O95477 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.64□□□□□ -2.15
ABCA1O95477 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ABCA1O95477 MTND4P35-201ENST00000604257 1375 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 Y_RNA.122-201ENST00000363331 96 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 RNA5SP138-201ENST00000365098 114 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 AC013404.1-201ENST00000413068 249 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 USP9YP27-201ENST00000418455 438 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 AL445685.2-201ENST00000422551 342 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 RPL23AP58-201ENST00000440453 469 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.64□□□□□ -2.15
ABCA1O95477 HMGB1P38-201ENST00000490557 577 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.64□□□□□ -2.15
ABCA1O95477 AC021087.2-201ENST00000504656 1203 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.64□□□□□ -2.15
ABCA1O95477 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.64□□□□□ -2.15
ABCA1O95477 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.64□□□□□ -2.15
ABCA1O95477 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA1O95477 AC005951.1-201ENST00000576706 485 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 MIR4255-201ENST00000579351 72 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.64□□□□□ -2.15
ABCA1O95477 AC091834.1-201ENST00000614543 472 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 PABPC1P7-201ENST00000413177 1513 ntBASIC1.64□□□□□ -2.15
ABCA1O95477 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA1O95477 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
ABCA1O95477 RNU6-799P-201ENST00000363567 107 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC023347.2-201ENST00000433994 462 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 RPL7P54-201ENST00000438336 674 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC009237.8-201ENST00000445492 379 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC090255.1-201ENST00000495779 349 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC011468.4-201ENST00000603942 409 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC092159.4-201ENST00000624944 550 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA1O95477 AL513331.1-201ENST00000411908 397 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA1O95477 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC005517.2-201ENST00000424673 553 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA1O95477 RPS26P30-201ENST00000443431 335 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC009961.3-201ENST00000449832 765 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 RPL23AP63-201ENST00000498752 471 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ABCA1O95477 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.63□□□□□ -2.15
ABCA1O95477 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
ABCA1O95477 RPAP2P1-201ENST00000603626 1168 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC139769.3-201ENST00000618383 175 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AL589994.2-201ENST00000621124 579 ntBASIC1.63□□□□□ -2.15
ABCA1O95477 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.63□□□□□ -2.15
ABCA1O95477 AC010680.1-201ENST00000590024 3590 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 RNU6-317P-201ENST00000384031 107 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AC027124.2-201ENST00000428249 105 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AC104332.2-201ENST00000429959 156 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 SCARNA17.1-201ENST00000516211 143 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 SCARNA17.2-201ENST00000516334 143 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 SNORA31.11-201ENST00000516528 139 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AF279873.1-201ENST00000523393 313 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 ISCA1P3-201ENST00000577104 373 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AC103810.1-201ENST00000579873 453 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 MIR3690-201ENST00000580266 75 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AC069304.3-201ENST00000603938 1084 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.62□□□□□ -2.15
ABCA1O95477 Y_RNA.783-201ENST00000613546 102 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 SCARNA17.4-201ENST00000614296 143 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AC011472.4-201ENST00000615848 491 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA1O95477 AP000553.5-201ENST00000641933 54 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ABCA1O95477 AP001350.1-201ENST00000601906 1524 ntBASIC1.62□□□□□ -2.15
ABCA1O95477 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.61□□□□□ -2.15
ABCA1O95477 RNA5SP160-201ENST00000364866 120 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AC240504.1-201ENST00000395709 845 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 FGF7P8-201ENST00000402994 292 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 AC092638.1-201ENST00000411966 1275 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ABCA1O95477 AC005005.2-201ENST00000420779 380 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 HSPE1P1-201ENST00000421494 318 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RPL23AP76-201ENST00000441860 458 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RPL23AP33-201ENST00000442301 452 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 CBWD4P-201ENST00000445695 655 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RPL31P53-201ENST00000457065 348 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RPL21P104-201ENST00000464143 478 ntBASIC1.61□□□□□ -2.15
ABCA1O95477 RNA5SP182-201ENST00000516064 82 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms